twobitreader: reader for the 2bit file format
A library and command line tool for working with 2bit files. 2bit is a compact file format for genomes introduced by Jim Kent with his BLAT suite in the early 2000s.
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- twobitreader-1.0.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
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| Versions [RSS] | 1.0 |
|---|---|
| Change log | CHANGELOG.md |
| Dependencies | base (>=4.8 && <4.21), bytestring (>=0.10.6 && <0.13), directory (>=1.2.2 && <1.4), mmap (>=0.5 && <0.6), optparse-applicative (>=0.13 && <0.19), primitive (>=0.6.1 && <0.10), twobitreader (>=1.0 && <1.1), unordered-containers (>=0.2.5.1 && <0.3), zlib (>=0.6 && <0.8) [details] |
| Tested with | ghc ==8.10.7, ghc ==9.4.8, ghc ==9.8.2, ghc ==9.10.1 |
| License | BSD-3-Clause |
| Copyright | (C) 2024 Udo Stenzel |
| Author | Udo Stenzel |
| Maintainer | u.stenzel@web.de |
| Category | Bioinformatics |
| Home page | https://bitbucket.org/ustenzel/twobittool |
| Source repo | head: git clone https://bitbucket.org/ustenzel/twobitreader.git |
| Uploaded | by ustenzel at 2024-09-12T14:02:01Z |
| Distributions | NixOS:1.0 |
| Executables | twobit |
| Downloads | 24 total (1 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
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| Status | Docs available [build log] Last success reported on 2024-09-12 [all 1 reports] |