BiobaseBlast: BLAST-related tools

[ bioinformatics, gpl, library ] [ Propose Tags ]

This library contains BLAST-related functionality:

The matrices are currently not provided but can be found here:

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Dependencies aeson (>=1.0), attoparsec (>=0.13), base (>=4.7 && <5.0), binary (>=0.7), BiobaseENA (==0.0.0.*), BiobaseTypes (==0.2.1.*), BiobaseXNA (==0.11.1.*), bytestring, cereal (>=0.4), containers, deepseq (>=1.3), directory, file-embed (>=0.0.10), lens (>=4.0), log-domain (>=0.12), mtl (>=2.0), PrimitiveArray (==0.10.1.*), SciBaseTypes (==0.1.1.*), text, unordered-containers, vector (>=0.11), vector-th-unbox (>=0.2) [details]
License GPL-3.0-only
Copyright Christian Hoener zu Siederdissen, 2013 - 2019
Author Christian Hoener zu Siederdissen, Florian Eggenhofer
Category Bioinformatics
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Source repo head: git clone
this: git clone
Uploaded by FlorianEggenhofer at 2021-06-05T21:06:10Z
Distributions NixOS:, Stackage:
Downloads 3656 total (23 in the last 30 days)
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Status Hackage Matrix CI
Docs available [build log]
Last success reported on 2021-06-05 [all 1 reports]


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Readme for BiobaseBlast-

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This library contains BLAST-related functionality.


Christian Hoener zu Siederdissen
Leipzig University, Leipzig, Germany