estreps: Repeats from ESTs
rselect - select a random set of sequences from a FASTA file, optinally with random orientation (forward/reverse complement).
reps - extract exact k-word repeats based that occur in sequences grouped in different clusters.
The Darcs repository is at: http://malde.org/~ketil/biohaskell/estreps.
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- estreps-0.3.1.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
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Versions [RSS] | 0.1, 0.3, 0.3.1 |
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Dependencies | base (>3 && <4), bio (>=0.4), bytestring, containers, random [details] |
License | LicenseRef-GPL |
Author | Ketil Malde |
Maintainer | Ketil Malde <ketil@malde.org> |
Category | Bioinformatics |
Home page | http://blog.malde.org/ |
Uploaded | by KetilMalde at 2009-10-07T13:01:48Z |
Distributions | |
Reverse Dependencies | 1 direct, 0 indirect [details] |
Executables | reps, rselect |
Downloads | 2744 total (4 in the last 30 days) |
Rating | (no votes yet) [estimated by Bayesian average] |
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Status | Docs not available [build log] All reported builds failed as of 2016-12-31 [all 6 reports] |