BlastHTTP: Libary to interface with the NCBI blast REST interface
Searches for a provided nucleotide or protein sequence with the NCBI Blast REST service and returns a blast result in xml format as BlastResult datatype.
For more information on BLAST refer to: http://blast.ncbi.nlm.nih.gov/Blast.cgi.
Information on the webservice can be found at: http://www.ncbi.nlm.nih.gov/BLAST/developer.shtml.
If you plan to submit more than 20 searches in one session, please look up the Usage Guidelines in the webservice information.
Downloads
- BlastHTTP-1.0.0.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
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For package maintainers and hackage trustees
Candidates
| Versions [RSS] | 0.0.1, 1.0.0, 1.0.1, 1.2.0, 1.2.1, 1.3.0, 1.4.0, 1.4.1, 1.4.2 |
|---|---|
| Dependencies | base (>=4.5 && <5), biocore, blastxml, bytestring, conduit, HTTP, http-conduit, hxt, mtl, network, transformers [details] |
| License | GPL-3.0-only |
| Author | Florian Eggenhofer |
| Maintainer | egg@tbi.univie.ac.at |
| Category | Bioinformatics |
| Home page | https://github.com/eggzilla/BlastHTTP |
| Source repo | head: git clone https://github.com/eggzilla/BlastHTTP this: darcs get https://github.com/eggzilla/BlastHTTP/tree/v1.0.0 --tag v1.0.0 |
| Uploaded | by FlorianEggenhofer at 2014-03-06T13:06:51Z |
| Distributions | |
| Reverse Dependencies | 2 direct, 0 indirect [details] |
| Downloads | 7514 total (21 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
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| Status | Docs not available [build log] All reported builds failed as of 2016-12-18 [all 6 reports] |