hs-samtools: Read and write SAM, BAM, and CRAM files.

[ bioinformatics, bsd3, library ] [ Propose Tags ] [ Report a vulnerability ]

A SAM, BAM, and CRAM file decoder/encoded along with various related functionality associated with these file formats.

Modules

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Data
- BAM
  - Version1_6
- SAM
  - Version1_6

Downloads

hs-samtools-0.10.0.3.tar.gz [browse] (Cabal source package)
Package description (as included in the package)

Maintainer's Corner

Package maintainers

MatthewMosior

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Candidates

0.1.0.0, 0.1.0.1, 0.2.0.0, 0.2.0.1, 0.3.0.0, 0.3.1.0, 0.4.0.0, 0.4.0.1, 0.4.0.2, 0.4.0.3, 0.4.0.4, 0.5.0.0, 0.5.0.1

Versions [RSS]	0.5.0.2, 0.5.0.3, 0.6.0.0, 0.6.0.1, 0.7.0.0, 0.8.0.0, 0.9.0.0, 0.10.0.0, 0.10.0.1, 0.10.0.2, 0.10.0.3 (info)
Change log	CHANGELOG.md
Dependencies	array (>=0.5.6 && <0.6), ascii (>=1.7.0 && <1.8), attoparsec (>=0.14.4 && <0.15), base (>=4.18.2 && <4.19), base16 (>=1.0 && <1.1), binary (>=0.8.9 && <0.9), bitvec (>=1.1.5 && <1.2), bytestring (>=0.11.5 && <0.12), containers (>=0.6.7 && <0.7), crypton (>=1.0.0 && <1.1), deepseq (>=1.4.8 && <1.5), digest (>=0.0.2 && <0.1), generic-deriving (>=1.14.5 && <1.15), mason (>=0.2.6 && <0.3), parser-combinators (>=1.3.0 && <1.4), parsers (>=0.12.11 && <0.13), pcre-heavy (>=1.0.0 && <1.1), regex-tdfa (>=1.3.2 && <1.4), streamly (>=0.10.0 && <0.11), streamly-bytestring (>=0.2.1 && <0.3), streamly-core (>=0.2.1 && <0.3), zlib (>=0.7.1 && <0.8) [details]
License	BSD-3-Clause
Author	Matthew Mosior
Maintainer	mattm.github@gmail.com
Category	Bioinformatics
Home page	https://github.com/Matthew-Mosior/hs-samtools
Bug tracker	https://github.com/Matthew-Mosior/hs-samtools/issues
Uploaded	by MatthewMosior at 2024-07-15T21:32:00Z
Distributions
Downloads	313 total (14 in the last 30 days)
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Status	Docs uploaded by user Build status unknown [no reports yet]