biostockholm: Parsing and rendering of Stockholm files (used by Pfam, Rfam and Infernal).

[ bioinformatics, bsd3, library ] [ Propose Tags ] [ Report a vulnerability ]

Parsing and rendering of files in Stockholm 1.0 format. Among the users of the Stockholm format are Pfam, Rfam and Infernal. These files hold information about families of proteins or non-coding RNAs. For more information, please see:

Modules

[Last Documentation]

Bio
- Sequence
  - Bio.Sequence.Stockholm
    - Bio.Sequence.Stockholm.Document
    - Bio.Sequence.Stockholm.Stream

Downloads

biostockholm-0.3.4.tar.gz [browse] (Cabal source package)
Package description (as included in the package)

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Package maintainers

FelipeLessa

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Versions [RSS]	0.1, 0.1.0.1, 0.2, 0.2.1, 0.2.2, 0.3, 0.3.1, 0.3.2, 0.3.3, 0.3.4
Dependencies	attoparsec (>=0.10 && <0.11), attoparsec-conduit (>=0.4 && <0.5), base (>=3 && <5), biocore (>=0.1 && <0.3), blaze-builder (>=0.3 && <0.4), blaze-builder-conduit (>=0.4 && <0.5), bytestring (>=0.9 && <0.10), conduit (>=0.4 && <0.5), containers (>=0.2 && <0.6), deepseq (>=1.1 && <1.4) [details]
License	BSD-3-Clause
Author	Felipe Lessa
Maintainer	felipe.lessa@gmail.com
Category	Bioinformatics
Source repo	head: git clone https://github.com/meteficha/biostockholm
Uploaded	by FelipeLessa at 2015-07-21T22:25:00Z
Distributions
Reverse Dependencies	1 direct, 0 indirect [details]
Downloads	7788 total (42 in the last 30 days)
Rating	(no votes yet) [estimated by Bayesian average]
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Status	Docs not available [build log] All reported builds failed as of 2016-10-27 [all 9 reports]