biohazard-0.6.13: bioinformatics support library

Index - S

sanitize_cigarBio.Bam.Trim, Bio.Bam
scalarMatBio.Adna
scaleFloatBio.Prelude
scanlBio.Prelude
scanl'Bio.Prelude
scanl1Bio.Prelude
scanrBio.Prelude
scanr1Bio.Prelude
secondBio.Prelude
SeekBio.Bam.Pileup
seekBio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam
SeekException 
1 (Type/Class)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam
2 (Data Constructor)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam
select'read'pendingBio.Iteratee.IO.Base
seqBio.Prelude
SeqidBio.Base, Bio.Prelude
sequenceBio.Prelude
sequenceABio.Prelude
sequenceA_Bio.Prelude
sequenceStreams_Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam
sequence_Bio.Prelude
setAllocationCounterBio.Prelude
setBitBio.Prelude
setEnvBio.Prelude
setEOFBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam
setFdModeBio.Prelude
setFdOptionBio.Prelude
setFdOwnerAndGroupBio.Prelude
setFdSizeBio.Prelude
setFdTimesHiResBio.Prelude
setFileCreationMaskBio.Prelude
setFileModeBio.Prelude
setFileSizeBio.Prelude
setFileTimesBio.Prelude
setFileTimesHiResBio.Prelude
setGroupIDModeBio.Prelude
setHandlerBio.Prelude
setLockBio.Prelude
setMDBio.Bam.Rmdup
setNumCapabilitiesBio.Prelude
setOwnerAndGroupBio.Prelude
SetOwnerAndGroupIsRestrictedBio.Prelude
setQualFlagBio.Bam.Rec, Bio.Bam
setSymbolicLinkOwnerAndGroupBio.Prelude
setSymbolicLinkTimesHiResBio.Prelude
setUncaughtExceptionHandlerBio.Prelude
setUserIDModeBio.Prelude
shiftBio.Prelude
shiftLBio.Prelude
shiftPositionBio.Base, Bio.Prelude
shiftRBio.Prelude
shiftRangeBio.Base, Bio.Prelude
ShowBio.Prelude
showBio.Prelude
showAlignedBio.Align
showBamMetaBio.Bam.Header, Bio.Bam
showCharBio.Prelude
showConstrBio.Prelude
showEFloatBio.Prelude
showFFloatBio.Prelude
showFFloatAltBio.Prelude
showFixedBio.Prelude
showFloatBio.Prelude
showGFloatBio.Prelude
showGFloatAltBio.Prelude
showHexBio.Prelude
showIntBio.Prelude
showIntAtBaseBio.Prelude
showListBio.Prelude
showLitCharBio.Prelude
showMdBio.Bam.Header, Bio.Bam
showNucleotideBio.Base, Bio.Prelude
showNucleotidesBio.Base, Bio.Prelude
showNumBio.Util.Numeric
showOctBio.Prelude
showOOMBio.Util.Numeric
showParenBio.Prelude
ShowSBio.Prelude
showsBio.Prelude
showSignedBio.Prelude
showsPrecBio.Prelude
showStringBio.Prelude
showsTypeRepBio.Prelude
showVersionBio.Prelude
sigmoid2Bio.Util.Numeric
SignalBio.Prelude
signalQSemBio.Prelude
signalQSemNBio.Prelude
significandBio.Prelude
signumBio.Prelude
sinBio.Prelude
SinglePop 
1 (Type/Class)Bio.Bam.Pileup
2 (Data Constructor)Bio.Bam.Pileup
single_pop_posteriorBio.Bam.Pileup
sinhBio.Prelude
sizeBio.Iteratee.Builder
SizeableBio.PriorityQueue
sizePQBio.PriorityQueue
skipToEofBio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam
SMaBio.Bam.Rec, Bio.Bam
SMa'Bio.Bam.Rmdup
sndBio.Prelude
socketModeBio.Prelude
SoftBio.TwoBit
someBio.Prelude
SomeAsyncException 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
SomeException 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
sortBio.Prelude
sortByBio.Prelude
sortOnBio.Prelude
sortWithBio.Prelude
SpaceBio.Prelude
SpacingCombiningMarkBio.Prelude
spanBio.Prelude
SpecialChunkBio.Iteratee.Bgzf
specialDeviceIDBio.Prelude
splitAtBio.Prelude
splitTyConAppBio.Prelude
sqrtBio.Prelude
sq_lengthBio.Bam.Header, Bio.Bam
sq_nameBio.Bam.Header, Bio.Bam
sq_other_shitBio.Bam.Header, Bio.Bam
ssd_deltaBio.Adna
ssd_kappaBio.Adna
ssd_lambdaBio.Adna
ssd_sigmaBio.Adna
STBio.Prelude
StableNameBio.Prelude
StackOverflowBio.Prelude
stackOverflowBio.Prelude
startBio.Bam.Regions, Bio.Bam.Index, Bio.Bam
stats_moreBio.Adna
statusChangeTimeBio.Prelude
statusChangeTimeHiResBio.Prelude
stderrBio.Prelude, Bio.Iteratee, Bio.Bam
stdErrorBio.Prelude
stdFileModeBio.Prelude
stdinBio.Prelude, Bio.Iteratee, Bio.Bam
stdInputBio.Prelude
stdoutBio.Prelude, Bio.Iteratee, Bio.Bam
stdOutputBio.Prelude
STM 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
StorableBio.Prelude
StreamBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam
stream2listBio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam
stream2streamBio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam
stream2vectorBio.Iteratee, Bio.Bam
stream2vectorNBio.Iteratee, Bio.Bam
StreamErrorBio.Iteratee.ZLib
StreamStatusBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam
STRefBio.Prelude
StringBio.Prelude
stripPrefixBio.Prelude
stToIOBio.Prelude
subsampleBamBio.Bam.Index, Bio.Bam
Subsequence 
1 (Type/Class)Bio.Bam.Regions, Bio.Bam.Index, Bio.Bam
2 (Data Constructor)Bio.Bam.Regions, Bio.Bam.Index, Bio.Bam
subsequencesBio.Prelude
SubstBio.Adna
SubstitutionStatsBio.Adna
substs3Bio.Adna
substs3cpgBio.Adna
substs3d3Bio.Adna
substs3d5Bio.Adna
substs3ddBio.Adna
substs5Bio.Adna
substs5cpgBio.Adna
substs5d3Bio.Adna
substs5d5Bio.Adna
substs5ddBio.Adna
subtractBio.Prelude
succBio.Prelude
Sum 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
sumBio.Prelude
sum_mapqBio.Bam.Pileup
sum_mapq_squaredBio.Bam.Pileup
SurrogateBio.Prelude
swapBio.Prelude
swapMVarBio.Prelude
SymbolicLinkLimitBio.Prelude
symbolicLinkModeBio.Prelude
SynchronousWritesBio.Prelude
SyncIOAvailableBio.Prelude
SystemErrorBio.Prelude