Index - S
| sanitize_cigar | Bio.Bam.Trim, Bio.Bam |
| scalarMat | Bio.Adna |
| scaleFloat | Bio.Prelude |
| scanl | Bio.Prelude |
| scanl' | Bio.Prelude |
| scanl1 | Bio.Prelude |
| scanr | Bio.Prelude |
| scanr1 | Bio.Prelude |
| second | Bio.Prelude |
| Seek | Bio.Bam.Pileup |
| seek | Bio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam |
| SeekException | |
| 1 (Type/Class) | Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam |
| 2 (Data Constructor) | Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam |
| select'read'pending | Bio.Iteratee.IO.Base |
| seq | Bio.Prelude |
| Seqid | Bio.Base, Bio.Prelude |
| sequence | Bio.Prelude |
| sequenceA | Bio.Prelude |
| sequenceA_ | Bio.Prelude |
| sequenceStreams_ | Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam |
| sequence_ | Bio.Prelude |
| setAllocationCounter | Bio.Prelude |
| setBit | Bio.Prelude |
| setEnv | Bio.Prelude |
| setEOF | Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam |
| setFdMode | Bio.Prelude |
| setFdOption | Bio.Prelude |
| setFdOwnerAndGroup | Bio.Prelude |
| setFdSize | Bio.Prelude |
| setFdTimesHiRes | Bio.Prelude |
| setFileCreationMask | Bio.Prelude |
| setFileMode | Bio.Prelude |
| setFileSize | Bio.Prelude |
| setFileTimes | Bio.Prelude |
| setFileTimesHiRes | Bio.Prelude |
| setGroupIDMode | Bio.Prelude |
| setHandler | Bio.Prelude |
| setLock | Bio.Prelude |
| setMD | Bio.Bam.Rmdup |
| setNumCapabilities | Bio.Prelude |
| setOwnerAndGroup | Bio.Prelude |
| SetOwnerAndGroupIsRestricted | Bio.Prelude |
| setQualFlag | Bio.Bam.Rec, Bio.Bam |
| setSymbolicLinkOwnerAndGroup | Bio.Prelude |
| setSymbolicLinkTimesHiRes | Bio.Prelude |
| setUncaughtExceptionHandler | Bio.Prelude |
| setUserIDMode | Bio.Prelude |
| shift | Bio.Prelude |
| shiftL | Bio.Prelude |
| shiftPosition | Bio.Base, Bio.Prelude |
| shiftR | Bio.Prelude |
| shiftRange | Bio.Base, Bio.Prelude |
| Show | Bio.Prelude |
| show | Bio.Prelude |
| showAligned | Bio.Align |
| showBamMeta | Bio.Bam.Header, Bio.Bam |
| showChar | Bio.Prelude |
| showConstr | Bio.Prelude |
| showEFloat | Bio.Prelude |
| showFFloat | Bio.Prelude |
| showFFloatAlt | Bio.Prelude |
| showFixed | Bio.Prelude |
| showFloat | Bio.Prelude |
| showGFloat | Bio.Prelude |
| showGFloatAlt | Bio.Prelude |
| showHex | Bio.Prelude |
| showInt | Bio.Prelude |
| showIntAtBase | Bio.Prelude |
| showList | Bio.Prelude |
| showLitChar | Bio.Prelude |
| showMd | Bio.Bam.Header, Bio.Bam |
| showNucleotide | Bio.Base, Bio.Prelude |
| showNucleotides | Bio.Base, Bio.Prelude |
| showNum | Bio.Util.Numeric |
| showOct | Bio.Prelude |
| showOOM | Bio.Util.Numeric |
| showParen | Bio.Prelude |
| ShowS | Bio.Prelude |
| shows | Bio.Prelude |
| showSigned | Bio.Prelude |
| showsPrec | Bio.Prelude |
| showString | Bio.Prelude |
| showsTypeRep | Bio.Prelude |
| showVersion | Bio.Prelude |
| sigmoid2 | Bio.Util.Numeric |
| Signal | Bio.Prelude |
| signalQSem | Bio.Prelude |
| signalQSemN | Bio.Prelude |
| significand | Bio.Prelude |
| signum | Bio.Prelude |
| sin | Bio.Prelude |
| SinglePop | |
| 1 (Type/Class) | Bio.Bam.Pileup |
| 2 (Data Constructor) | Bio.Bam.Pileup |
| single_pop_posterior | Bio.Bam.Pileup |
| sinh | Bio.Prelude |
| size | Bio.Iteratee.Builder |
| Sizeable | Bio.PriorityQueue |
| sizePQ | Bio.PriorityQueue |
| skipToEof | Bio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam |
| SMa | Bio.Bam.Rec, Bio.Bam |
| SMa' | Bio.Bam.Rmdup |
| snd | Bio.Prelude |
| socketMode | Bio.Prelude |
| Soft | Bio.TwoBit |
| some | Bio.Prelude |
| SomeAsyncException | |
| 1 (Data Constructor) | Bio.Prelude |
| 2 (Type/Class) | Bio.Prelude |
| SomeException | |
| 1 (Data Constructor) | Bio.Prelude |
| 2 (Type/Class) | Bio.Prelude |
| sort | Bio.Prelude |
| sortBy | Bio.Prelude |
| sortOn | Bio.Prelude |
| sortWith | Bio.Prelude |
| Space | Bio.Prelude |
| SpacingCombiningMark | Bio.Prelude |
| span | Bio.Prelude |
| SpecialChunk | Bio.Iteratee.Bgzf |
| specialDeviceID | Bio.Prelude |
| splitAt | Bio.Prelude |
| splitTyConApp | Bio.Prelude |
| sqrt | Bio.Prelude |
| sq_length | Bio.Bam.Header, Bio.Bam |
| sq_name | Bio.Bam.Header, Bio.Bam |
| sq_other_shit | Bio.Bam.Header, Bio.Bam |
| ssd_delta | Bio.Adna |
| ssd_kappa | Bio.Adna |
| ssd_lambda | Bio.Adna |
| ssd_sigma | Bio.Adna |
| ST | Bio.Prelude |
| StableName | Bio.Prelude |
| StackOverflow | Bio.Prelude |
| stackOverflow | Bio.Prelude |
| start | Bio.Bam.Regions, Bio.Bam.Index, Bio.Bam |
| stats_more | Bio.Adna |
| statusChangeTime | Bio.Prelude |
| statusChangeTimeHiRes | Bio.Prelude |
| stderr | Bio.Prelude, Bio.Iteratee, Bio.Bam |
| stdError | Bio.Prelude |
| stdFileMode | Bio.Prelude |
| stdin | Bio.Prelude, Bio.Iteratee, Bio.Bam |
| stdInput | Bio.Prelude |
| stdout | Bio.Prelude, Bio.Iteratee, Bio.Bam |
| stdOutput | Bio.Prelude |
| STM | |
| 1 (Data Constructor) | Bio.Prelude |
| 2 (Type/Class) | Bio.Prelude |
| Storable | Bio.Prelude |
| Stream | Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam |
| stream2list | Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam |
| stream2stream | Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam |
| stream2vector | Bio.Iteratee, Bio.Bam |
| stream2vectorN | Bio.Iteratee, Bio.Bam |
| StreamError | Bio.Iteratee.ZLib |
| StreamStatus | Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam |
| STRef | Bio.Prelude |
| String | Bio.Prelude |
| stripPrefix | Bio.Prelude |
| stToIO | Bio.Prelude |
| subsampleBam | Bio.Bam.Index, Bio.Bam |
| Subsequence | |
| 1 (Type/Class) | Bio.Bam.Regions, Bio.Bam.Index, Bio.Bam |
| 2 (Data Constructor) | Bio.Bam.Regions, Bio.Bam.Index, Bio.Bam |
| subsequences | Bio.Prelude |
| Subst | Bio.Adna |
| SubstitutionStats | Bio.Adna |
| substs3 | Bio.Adna |
| substs3cpg | Bio.Adna |
| substs3d3 | Bio.Adna |
| substs3d5 | Bio.Adna |
| substs3dd | Bio.Adna |
| substs5 | Bio.Adna |
| substs5cpg | Bio.Adna |
| substs5d3 | Bio.Adna |
| substs5d5 | Bio.Adna |
| substs5dd | Bio.Adna |
| subtract | Bio.Prelude |
| succ | Bio.Prelude |
| Sum | |
| 1 (Data Constructor) | Bio.Prelude |
| 2 (Type/Class) | Bio.Prelude |
| sum | Bio.Prelude |
| sum_mapq | Bio.Bam.Pileup |
| sum_mapq_squared | Bio.Bam.Pileup |
| Surrogate | Bio.Prelude |
| swap | Bio.Prelude |
| swapMVar | Bio.Prelude |
| SymbolicLinkLimit | Bio.Prelude |
| symbolicLinkMode | Bio.Prelude |
| SynchronousWrites | Bio.Prelude |
| SyncIOAvailable | Bio.Prelude |
| SystemError | Bio.Prelude |