p'check_waiting | Bio.Bam.Pileup |
p'feed_input | Bio.Bam.Pileup |
p'scan_active | Bio.Bam.Pileup |
packBam | Bio.Bam.Writer, Bio.Bam |
Pad | Bio.Bam.Rec, Bio.Bam |
Pad' | Bio.Bam.Rmdup |
Pair | Bio.Prelude |
par | Bio.Prelude |
ParagraphSeparator | Bio.Prelude |
parMapChunksIO | Bio.Iteratee, Bio.Iteratee.Bgzf, Bio.Bam |
parRunIO | Bio.Iteratee, Bio.Bam |
parseBamMeta | Bio.Bam.Header, Bio.Bam |
parseBamMetaLine | Bio.Bam.Header, Bio.Bam |
ParseError | |
1 (Type/Class) | Bio.Iteratee, Bio.Bam |
2 (Data Constructor) | Bio.Iteratee, Bio.Bam |
parseFastq | Bio.Bam.Fastq, Bio.Bam |
parseFastq' | Bio.Bam.Fastq, Bio.Bam |
parseFastqCassava | Bio.Bam.Fastq, Bio.Bam |
parserToIteratee | Bio.Iteratee, Bio.Bam |
parseVersion | Bio.Prelude |
partition | Bio.Prelude |
partitionEithers | Bio.Prelude |
PathNameLimit | Bio.Prelude |
PathVar | Bio.Prelude |
PatternMatchFail | |
1 (Data Constructor) | Bio.Prelude |
2 (Type/Class) | Bio.Prelude |
peekMinPQ | Bio.PriorityQueue |
peekStream | Bio.Iteratee.ListLike, Bio.Iteratee, Bio.Bam |
performGC | Bio.Prelude |
performMajorGC | Bio.Prelude |
performMinorGC | Bio.Prelude |
PermissionDenied | Bio.Prelude |
permissionErrorType | Bio.Prelude |
permutations | Bio.Prelude |
phase | Bio.Prelude |
pi | Bio.Prelude |
Pico | Bio.Prelude |
Pile | |
1 (Type/Class) | Bio.Bam.Pileup |
2 (Data Constructor) | Bio.Bam.Pileup |
Pile' | Bio.Bam.Pileup |
PileF | Bio.Bam.Pileup |
PileM | |
1 (Type/Class) | Bio.Bam.Pileup |
2 (Data Constructor) | Bio.Bam.Pileup |
pileup | Bio.Bam.Pileup |
pileup' | Bio.Bam.Pileup |
pileup'' | Bio.Bam.Pileup |
pipeBamOutput | Bio.Bam.Writer, Bio.Bam |
PipeBufferLimit | Bio.Prelude |
pipeSamOutput | Bio.Bam.Writer, Bio.Bam |
polar | Bio.Prelude |
popCount | Bio.Prelude |
popCountDefault | Bio.Prelude |
popQ | Bio.Iteratee, Bio.Bam |
Pos | Bio.Base, Bio.Prelude |
Position | Bio.Base, Bio.Prelude |
PosPrimChunks | Bio.Bam.Pileup |
pow | Bio.Base, Bio.Prelude |
PQ | Bio.PriorityQueue |
PQ_Conf | |
1 (Type/Class) | Bio.PriorityQueue |
2 (Data Constructor) | Bio.PriorityQueue |
Pr | Bio.Base, Bio.Prelude |
pred | Bio.Prelude |
Prefix | Bio.Prelude |
PrimBase | Bio.Bam.Pileup |
PrimChunks | Bio.Bam.Pileup |
prim_match_ad | Bio.Bam.Trim, Bio.Bam |
prim_match_reads | Bio.Bam.Trim, Bio.Bam |
print | Bio.Prelude |
printf | Bio.Prelude |
printLines | Bio.Iteratee.Char, Bio.Iteratee, Bio.Bam |
printLinesUnterminated | Bio.Iteratee.Char, Bio.Iteratee, Bio.Bam |
PrioIOAvailable | Bio.Prelude |
PrivateUse | Bio.Prelude |
Prob | Bio.Base, Bio.Prelude |
Prob' | Bio.Base, Bio.Prelude |
probToQual | Bio.Base, Bio.Prelude |
prob_div | Bio.Bam.Pileup |
prob_het | Bio.Bam.Pileup |
ProcessGroupID | Bio.Prelude |
ProcessID | Bio.Prelude |
Product | |
1 (Data Constructor) | Bio.Prelude |
2 (Type/Class) | Bio.Prelude |
product | Bio.Prelude |
progressBam | Bio.Bam.Rec, Bio.Bam |
progressGen | Bio.Iteratee, Bio.Bam |
progressNum | Bio.Iteratee, Bio.Bam |
progressPos | Bio.Iteratee, Bio.Bam |
properBases | Bio.Base, Bio.Prelude |
properFraction | Bio.Prelude |
protectTerm | Bio.Iteratee, Bio.Bam |
ProtocolError | Bio.Prelude |
Proxy | |
1 (Data Constructor) | Bio.Prelude |
2 (Type/Class) | Bio.Prelude |
pseq | Bio.Prelude |
pure | Bio.Prelude |
pushBam | Bio.Bam.Writer, Bio.Bam |
pushQ | Bio.Iteratee, Bio.Bam |
putChar | Bio.Prelude |
putMVar | Bio.Prelude |
putStr | Bio.Prelude |
putStrLn | Bio.Prelude |
putTraceMsg | Bio.Prelude |
p_indel_pile | Bio.Bam.Pileup |
p_indel_stat | Bio.Bam.Pileup |
p_is_reverse | Bio.Base, Bio.Prelude |
p_pos | Bio.Bam.Pileup |
p_refseq | Bio.Bam.Pileup |
p_seq | Bio.Base, Bio.Prelude |
p_snp_pile | Bio.Bam.Pileup |
p_snp_stat | Bio.Bam.Pileup |
p_start | Bio.Base, Bio.Prelude |