BiobaseHTTP: Libary to interface with the Bioinformatics HTTP services - Entrez Ensembl
BiobaseHTTP provides functions to interface the Bioinformatics REST services - Entrez Ensembl
NCBI Entrez provides multiple different databases and eutils.
For more information on Entrez refer to: http://www.ncbi.nlm.nih.gov/gquery/.
Information on the webservice can be found at: http://www.ncbi.nlm.nih.gov/books/NBK25497/. If you plan to include the library in a tool, register it as explained here.
Information on ENSEMBL genomes API can be found here: http://rest.ensemblgenomes.org/.
BiobaseHTTP is the successor of the deprecated EntrezHTTP library.
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- BiobaseHTTP-1.2.0.tar.gz [browse] (Cabal source package)
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| Versions [RSS] | 1.1.0, 1.2.0 |
|---|---|
| Change log | ChangeLog.md |
| Dependencies | aeson, base (>=4.5 && <5), BiobaseEnsembl, bytestring, conduit, either-unwrap, HTTP, http-conduit, hxt, mtl, network (<=2.8.0.0), Taxonomy (>=2.0.0), text, transformers [details] |
| Tested with | ghc ==8.4.4, ghc ==8.6.5 |
| License | GPL-3.0-only |
| Copyright | Florian Eggenhofer |
| Author | Florian Eggenhofer |
| Maintainer | egg@informatik.uni-freiburg.de |
| Category | Bioinformatics |
| Home page | https://github.com/eggzilla/BiobaseHTTP |
| Source repo | head: git clone https://github.com/eggzilla/BiobaseHTTP this: git clone https://github.com/eggzilla/BiobaseHTTP/tree/1.2.0(tag 1.2.0) |
| Uploaded | by FlorianEggenhofer at 2019-11-20T21:19:53Z |
| Distributions | |
| Reverse Dependencies | 1 direct, 0 indirect [details] |
| Downloads | 1247 total (10 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
| Your Rating | |
| Status | Docs available [build log] Last success reported on 2019-11-20 [all 1 reports] |
Readme for BiobaseHTTP-1.2.0
[back to package description]BiobaseHTTP
BiobaseHTTP provides functions to interface the Bioinformatics REST services - Entrez Ensembl.
NCBI Entrez provides multiple different databases and eutils.
For more information on Entrez refer to: Entrez.
Information on the webservice can be found at: NCBI books.
Information on ENSEMBL genomes API can be found here: Ensembl Genomes.
If you plan to include the library in a tool, register it as explained here.
BiobaseHTTP is the successor of the deprecated EntrezHTTP library.