Contents
Index
elynx-seq-0.1.0: Handle molecular sequences
A
B
C
D
E
F
G
H
I
J
K
L
M
N
P
Q
R
S
T
U
V
W
X
Y
Z
All
Index - T
T
1 (Data Constructor)
ELynx.Data.Character.AminoAcidX
2 (Data Constructor)
ELynx.Data.Character.AminoAcidS
3 (Data Constructor)
ELynx.Data.Character.AminoAcidI
4 (Data Constructor)
ELynx.Data.Character.AminoAcid
5 (Data Constructor)
ELynx.Data.Character.Nucleotide
6 (Data Constructor)
ELynx.Data.Character.NucleotideI
7 (Data Constructor)
ELynx.Data.Character.NucleotideX
toByteString
ELynx.Data.Sequence.Sequence
toChar
1 (Function)
ELynx.Data.Character.Character
2 (Function)
ELynx.Data.Alphabet.Character
toCountsFile
ELynx.Export.Sequence.CountsFile
toCVec
ELynx.Data.Alphabet.Character
toExchangeabilityMatrix
ELynx.Data.MarkovProcess.RateMatrix
toFrequencyData
ELynx.Data.Sequence.Alignment
toIndex
ELynx.Data.Character.BoundaryMutation
toSequences
ELynx.Data.Sequence.Alignment
toStandard
ELynx.Data.Character.Character
toStd
ELynx.Data.Alphabet.Alphabet
toString
1 (Function)
ELynx.Data.Character.Character
2 (Function)
ELynx.Data.Alphabet.Character
totalRate
1 (Function)
ELynx.Data.MarkovProcess.RateMatrix
2 (Function)
ELynx.Data.MarkovProcess.SubstitutionModel
toWord
1 (Function)
ELynx.Data.Character.Character
2 (Function)
ELynx.Data.Alphabet.Character
translate
ELynx.Data.Character.Codon
translateI
ELynx.Data.Character.Codon
translateSeq
ELynx.Data.Sequence.Translate
translateX
ELynx.Data.Character.Codon
trim
ELynx.Data.Sequence.Sequence