Contents
Index
elynx-seq-0.1.0: Handle molecular sequences
A
B
C
D
E
F
G
H
I
J
K
L
M
N
P
Q
R
S
T
U
V
W
X
Y
Z
All
Index - P
P
1 (Data Constructor)
ELynx.Data.Character.AminoAcidX
2 (Data Constructor)
ELynx.Data.Character.AminoAcidS
3 (Data Constructor)
ELynx.Data.Character.AminoAcidI
4 (Data Constructor)
ELynx.Data.Character.AminoAcid
Params
ELynx.Data.MarkovProcess.SubstitutionModel
Parser
1 (Type/Class)
ELynx.Import.MarkovProcess.EDMModelPhylobayes
2 (Type/Class)
ELynx.Import.MarkovProcess.SiteprofilesPhylobayes
3 (Type/Class)
ELynx.Import.Sequence.Fasta
phylobayes
ELynx.Import.MarkovProcess.EDMModelPhylobayes
PhyloModel
ELynx.Data.MarkovProcess.PhyloModel
Ply
ELynx.Data.Character.BoundaryMutation
plyA
ELynx.Data.Character.BoundaryMutation
plyB
ELynx.Data.Character.BoundaryMutation
plyI
ELynx.Data.Character.BoundaryMutation
plyN
ELynx.Data.Character.BoundaryMutation
poisson
ELynx.Data.MarkovProcess.AminoAcid
poissonCustom
ELynx.Data.MarkovProcess.AminoAcid
PopulationNames
ELynx.Export.Sequence.CountsFile
PopulationSize
ELynx.Data.Character.BoundaryMutation
Pos
ELynx.Export.Sequence.CountsFile
ProbMatrix
ELynx.Simulate.MarkovProcess
probMatrix
ELynx.Simulate.MarkovProcess
Protein
ELynx.Data.Alphabet.Alphabet
ProteinI
ELynx.Data.Alphabet.Alphabet
ProteinS
ELynx.Data.Alphabet.Alphabet
ProteinX
ELynx.Data.Alphabet.Alphabet