Index - C
| C | Bio.Util.AD |
| C2 | Bio.Util.AD2 |
| c2w | Bio.Base, Bio.TwoBit |
| called_sites | Bio.Genocall.AvroFile |
| Calls | Bio.Genocall |
| CallStats | |
| 1 (Type/Class) | Bio.Bam.Pileup |
| 2 (Data Constructor) | Bio.Bam.Pileup |
| cancelAll | Bio.Iteratee, Bio.Bam |
| cast | Data.Avro |
| Char | Bio.Bam.Rec, Bio.Bam |
| cheap_collapse | Bio.Bam.Rmdup |
| cheap_collapse_keep | Bio.Bam.Rmdup |
| checkErr | Bio.Iteratee, Bio.Bam |
| check_sort | Bio.Bam.Rmdup |
| choose | Bio.Util.Numeric |
| Chunk | Bio.Iteratee, Bio.Bam |
| Cigar | Bio.Bam.Rec, Bio.Bam |
| CigOp | Bio.Bam.Rec, Bio.Bam |
| clampPosition | Bio.TwoBit |
| clr_active | Bio.Bam.Pileup |
| Collapse | Bio.Bam.Rmdup |
| combineCoordinates | Bio.Bam.Reader, Bio.Bam |
| Combined | Bio.Util.AD |
| combineNames | Bio.Bam.Reader, Bio.Bam |
| compact_likelihoods | Bio.Genocall.AvroFile |
| compareNames | Bio.Bam.Header, Bio.Bam |
| compl | Bio.Base, Bio.TwoBit |
| complexEntropy | Bio.Bam.Filter, Bio.Bam |
| complexSimple | Bio.Bam.Filter, Bio.Bam |
| compls | Bio.Base, Bio.TwoBit |
| compressBgzf | Bio.Iteratee.Bgzf, Bio.Bam.Reader, Bio.Bam |
| compressBgzf' | Bio.Iteratee.Bgzf |
| compressBgzfLv | Bio.Iteratee.Bgzf |
| compressBufferSize | Bio.Iteratee.ZLib |
| compressChunk | Bio.Iteratee.Bgzf |
| compressDictionary | Bio.Iteratee.ZLib |
| CompressionLevel | |
| 1 (Type/Class) | Bio.Iteratee.ZLib |
| 2 (Data Constructor) | Bio.Iteratee.ZLib |
| CompressionStrategy | Bio.Iteratee.ZLib |
| compression_level | Bio.Iteratee.Bgzf |
| compressLevel | Bio.Iteratee.ZLib |
| compressMemoryLevel | Bio.Iteratee.ZLib |
| compressMethod | Bio.Iteratee.ZLib |
| CompressParams | |
| 1 (Type/Class) | Bio.Iteratee.Bgzf |
| 2 (Data Constructor) | Bio.Iteratee.Bgzf |
| 3 (Type/Class) | Bio.Iteratee.ZLib |
| 4 (Data Constructor) | Bio.Iteratee.ZLib |
| compressStrategy | Bio.Iteratee.ZLib |
| compressWindowBits | Bio.Iteratee.ZLib |
| concatDefaultInputs | Bio.Bam.Reader, Bio.Bam |
| concatInputs | Bio.Bam.Reader, Bio.Bam |
| concatMapStream | Bio.Iteratee, Bio.Bam |
| concatMapStreamM | Bio.Iteratee, Bio.Bam |
| conf_region | Bio.Genocall.Metadata |
| consume_active | Bio.Bam.Pileup |
| cons_collapse | Bio.Bam.Rmdup |
| cons_collapse_keep | Bio.Bam.Rmdup |
| ContainerOpts | |
| 1 (Type/Class) | Data.Avro |
| 2 (Data Constructor) | Data.Avro |
| convStream | Bio.Iteratee, Bio.Bam |
| Coordinate | Bio.Bam.Header, Bio.Bam |