bio-0.4.4: A bioinformatics library
Contents
Index
A
B
C
D
E
F
G
H
I
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
!
?
Index (F)
Feature
1 (Type/Class)
Bio.GFF3.Feature
2 (Data Constructor)
Bio.GFF3.Feature
FeatureHier
Bio.GFF3.FeatureHier
FeatureHierSequences
Bio.GFF3.FeatureHierSequences
features
1 (Function)
Bio.GFF3.FeatureHier
2 (Function)
Bio.GFF3.FeatureHierSequences
featureSequence
Bio.GFF3.FeatureHierSequences
filter_dots
Bio.Sequence.SFF_filters
filter_empty
Bio.Sequence.SFF_filters
filter_key
Bio.Sequence.SFF_filters
filter_length
Bio.Sequence.SFF_filters
filter_mixed
Bio.Sequence.SFF_filters
filter_qual20
Bio.Sequence.SFF_filters
filter_sigint
Bio.Sequence.SFF_filters
flatten
Bio.Alignment.BlastFlat
Flow
Bio.Sequence.SFF
flow
Bio.Sequence.SFF
flowgram
Bio.Sequence.SFF
flowgram_fmt
Bio.Sequence.SFF
flowToBasePos
Bio.Sequence.SFF
flow_data
Bio.Sequence.SFF
flow_index
Bio.Sequence.SFF
flow_length
Bio.Sequence.SFF
fragments
Bio.Alignment.ACE
Frame
Bio.Alignment.BlastData
,
Bio.Alignment.BlastFlat
fromIUPAC
Bio.Sequence.SeqData
,
Bio.Sequence
fromList
1 (Function)
Bio.Location.LocMap
2 (Function)
Bio.Location.SeqLocMap
3 (Function)
Bio.GFF3.FeatureHier
fromLists
Bio.GFF3.FeatureHierSequences
fromN
Bio.Util.TestBase
fromPosLen
Bio.Location.ContigLocation
fromQ
Bio.Util.TestBase
fromStartEnd
Bio.Location.ContigLocation
fromStr
Bio.Sequence.SeqData
,
Bio.Sequence
ftype
Bio.GFF3.Feature
Func
Bio.Sequence.GeneOntology
, Bio.Sequence.GOA
Fwd
1 (Data Constructor)
Bio.Alignment.AlignData
2 (Data Constructor)
Bio.Location.Strand
3 (Data Constructor)
Bio.Alignment.BED