seqloc-0.6.1.1: Handle sequence locations for bioinformatics

Index

!?Bio.SeqLoc.ShiftedVector
//Bio.SeqLoc.ShiftedVector
acceptorBio.SeqLoc.Transcript
allPosBio.SeqLoc.Location
andSameSeqBio.SeqLoc.OnSeq
atPosBio.SeqLoc.Position
boundsBio.SeqLoc.Location
cdsBio.SeqLoc.Transcript
cdsLocationBio.SeqLoc.Transcript
clocIntoBio.SeqLoc.Location
clocOutofBio.SeqLoc.Location
complBio.SeqLoc.Strand
concatBio.SeqLoc.SeqLike
ContigLocBio.SeqLoc.Location
contigOverlapsBio.SeqLoc.Location
ContigSeqLocBio.SeqLoc.OnSeq
contigSpanBio.SeqLoc.SpliceLocation
donorBio.SeqLoc.Transcript
emptyBio.SeqLoc.ShiftedVector
emptyLMBio.SeqLoc.LocMap
emptySLMBio.SeqLoc.LocMap
emptyZBio.SeqLoc.ShiftedVector
endBio.SeqLoc.ShiftedVector
endPosBio.SeqLoc.Location
ensureHighBio.SeqLoc.ShiftedVector
ensureLowBio.SeqLoc.ShiftedVector
extendBio.SeqLoc.Location
fromBoundsStrandBio.SeqLoc.Location
fromContigsBio.SeqLoc.SpliceLocation
fromDonorAcceptorBio.SeqLoc.Transcript
fromPosLenBio.SeqLoc.Location
fromStartEndBio.SeqLoc.Location
geneIdBio.SeqLoc.Transcript
insertLocBio.SeqLoc.LocMap
insertSeqLocBio.SeqLoc.LocMap
intronBio.SeqLoc.Transcript
Junction 
1 (Type/Class)Bio.SeqLoc.Transcript
2 (Data Constructor)Bio.SeqLoc.Transcript
junctionsBio.SeqLoc.Transcript
length 
1 (Function)Bio.SeqLoc.ShiftedVector
2 (Function)Bio.SeqLoc.SeqLike
3 (Function)Bio.SeqLoc.Location
LocatableBio.SeqLoc.LocMap
locatableSeqLocMapBio.SeqLoc.LocMap
locateBio.SeqLoc.LocMap
LocationBio.SeqLoc.Location
locationBio.SeqLoc.Transcript
locIntoBio.SeqLoc.SpliceLocation
LocMapBio.SeqLoc.LocMap
locOutofBio.SeqLoc.SpliceLocation
LocReprBio.SeqLoc.LocRepr
mergeAdjContigsBio.SeqLoc.SpliceLocation
mergeContigsBio.SeqLoc.SpliceLocation
MinusBio.SeqLoc.Strand
modifySomeBio.SeqLoc.ShiftedVector
ntAtBio.SeqLoc.SeqLike
nullBio.SeqLoc.ShiftedVector
nullisBio.SeqLoc.ShiftedVector
Offset 
1 (Data Constructor)Bio.SeqLoc.Position
2 (Type/Class)Bio.SeqLoc.Position
offsetBio.SeqLoc.Position
offset5Bio.SeqLoc.Location
offsetWithinBio.SeqLoc.Location
OnSeq 
1 (Type/Class)Bio.SeqLoc.OnSeq
2 (Data Constructor)Bio.SeqLoc.OnSeq
onSeqLabelBio.SeqLoc.OnSeq
overlapsBio.SeqLoc.Location
PlusBio.SeqLoc.Strand
Pos 
1 (Type/Class)Bio.SeqLoc.Position
2 (Data Constructor)Bio.SeqLoc.Position
posIntoBio.SeqLoc.Location
posOutofBio.SeqLoc.Location
posWithinBio.SeqLoc.Location
queryLocBio.SeqLoc.LocMap
queryLocatableBio.SeqLoc.LocMap
queryLocCompatibleBio.SeqLoc.LocMap
queryLocIntoBio.SeqLoc.LocMap
querySeqLocBio.SeqLoc.LocMap
replicateBio.SeqLoc.ShiftedVector
reprBio.SeqLoc.LocRepr
reprStrBio.SeqLoc.LocRepr
revComplBio.SeqLoc.Strand
seqDataBio.SeqLoc.Location
seqDataPadBio.SeqLoc.Location
SeqLabel 
1 (Data Constructor)Bio.SeqLoc.OnSeq
2 (Type/Class)Bio.SeqLoc.OnSeq
SeqLikeBio.SeqLoc.SeqLike
SeqLocMapBio.SeqLoc.LocMap
SeqOffsetBio.SeqLoc.OnSeq
SeqPosBio.SeqLoc.OnSeq
ShiftedVector 
1 (Type/Class)Bio.SeqLoc.ShiftedVector
2 (Data Constructor)Bio.SeqLoc.ShiftedVector
singleton 
1 (Function)Bio.SeqLoc.ShiftedVector
2 (Function)Bio.SeqLoc.SpliceLocation
slide 
1 (Function)Bio.SeqLoc.Position
2 (Function)Bio.SeqLoc.Location
sortContigsBio.SeqLoc.Transcript
SpliceLocBio.SeqLoc.SpliceLocation
SpliceSeqLocBio.SeqLoc.OnSeq
startBio.SeqLoc.ShiftedVector
startPosBio.SeqLoc.Location
StrandBio.SeqLoc.Strand
strand 
1 (Function)Bio.SeqLoc.Position
2 (Function)Bio.SeqLoc.Location
StrandedBio.SeqLoc.Strand
strandedBio.SeqLoc.Strand
subseqBio.SeqLoc.SeqLike
subseqPadBio.SeqLoc.SeqLike
toContigsBio.SeqLoc.Location
toSeqLabelBio.SeqLoc.OnSeq
Transcript 
1 (Type/Class)Bio.SeqLoc.Transcript
2 (Data Constructor)Bio.SeqLoc.Transcript
transcriptSeqLocMapBio.SeqLoc.LocMap
trxIdBio.SeqLoc.Transcript
unOffBio.SeqLoc.Position
unOnSeqBio.SeqLoc.OnSeq
unreprBio.SeqLoc.LocRepr
unreprEitherBio.SeqLoc.LocRepr
unreprErrBio.SeqLoc.LocRepr
unreprMaybeBio.SeqLoc.LocRepr
unSeqLabelBio.SeqLoc.OnSeq
unSLBio.SeqLoc.OnSeq
utr3Bio.SeqLoc.Transcript
utr5Bio.SeqLoc.Transcript
vectorBio.SeqLoc.ShiftedVector
withLocateBio.SeqLoc.LocMap
WithLocation 
1 (Type/Class)Bio.SeqLoc.LocMap
2 (Data Constructor)Bio.SeqLoc.LocMap
withoutLocationBio.SeqLoc.LocMap
zeroisBio.SeqLoc.ShiftedVector