Genbank: Libary for processing the NCBI genbank format
Haskell cabal Genbank libary contains tools, parser and datastructures for the NCBI (National Center for Biotechnology Information) Genbank format.
For more information on genbank refer to: http://www.ncbi.nlm.nih.gov/genbank/
For a sample genbank record see: http://www.ncbi.nlm.nih.gov/Sitemap/samplerecord.html
Bio.GenbankData - Datastructures for Genbank format
Contains Haskell datastructures for Genbank format and for contained features, subfeatures
Bio.GenbankParser - Parse Genbank format
Contains Haskell functions to parse Genbank format from files or internal Strings.
Bio.GenbankTools - Tools for processing Genbank
Contains Haskell functions to extract nucleotide sequences for features
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- Genbank-1.0.3.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
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For package maintainers and hackage trustees
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| Versions [RSS] | 1.0.0, 1.0.1, 1.0.2, 1.0.3 |
|---|---|
| Dependencies | base (>=4.5 && <5), biocore, biofasta, bytestring, cmdargs, Genbank, parsec, split [details] |
| License | LicenseRef-GPL |
| Author | Florian Eggenhofer |
| Maintainer | egg@tbi.univie.ac.at |
| Category | Bioinformatics |
| Source repo | head: git clone https://github.com/eggzilla/Genbank this: git clone https://github.com/eggzilla/Genbank/tree/1.0.3(tag 1.0.3) |
| Uploaded | by FlorianEggenhofer at 2014-10-26T13:29:26Z |
| Distributions | |
| Reverse Dependencies | 1 direct, 0 indirect [details] |
| Executables | GenbankTest |
| Downloads | 4293 total (10 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
| Your Rating | |
| Status | Docs uploaded by user Build status unknown [no reports yet] |
Readme for Genbank-1.0.3
[back to package description]#Genbank 
Haskell cabal Genbank libary contains tools, parser and datastructures for the NCBI (National Center for Biotechnology Information) Genbank format. For more information on genbank refer to:
http://www.ncbi.nlm.nih.gov/genbank/
For a sample genbank record see:
http://www.ncbi.nlm.nih.gov/Sitemap/samplerecord.html
###Datastructures for Genbank format (GenbankData.hs) Contains Haskell datastructures for Genbank format and for contained features, subfeatures ###Parse Genbank format (GenbankParser.hs) Contains Haskell functions to parse Genbank format from files or internal Strings. ###Tools for processing Genbank (GenbankTools) Contains Haskell functions to extract nucleotide sequences for features