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Directory listing for elynx-seq-0.0.1 source tarball

elynx-seq-0.0.1/

• ChangeLog.md
• LICENSE
• README.md
• elynx-seq.cabal
• src/
  • ELynx/
    • Data/
      • Alphabet/
        • Alphabet.hs
        • Character.hs
        • DistributionDiversity.hs
      • Character/
        • AminoAcid.hs
        • AminoAcidI.hs
        • AminoAcidS.hs
        • AminoAcidX.hs
        • BoundaryMutation.hs
        • Character.hs
        • Codon.hs
        • Nucleotide.hs
        • NucleotideI.hs
        • NucleotideX.hs
      • MarkovProcess/
        • AminoAcid.hs
        • CXXModels.hs
        • CXXModelsData.hs
        • EDMModel.hs
        • GammaRateHeterogeneity.hs
        • MixtureModel.hs
        • Nucleotide.hs
        • PhyloModel.hs
        • RateMatrix.hs
        • SubstitutionModel.hs
      • Sequence/
        • Defaults.hs
        • MultiSequenceAlignment.hs
        • Sequence.hs
        • Translate.hs
    • Export/
      • Sequence/
        • CountsFile.hs
        • Fasta.hs
    • Import/
      • MarkovProcess/
        • EDMModelPhylobayes.hs
      • Sequence/
        • Fasta.hs
    • Simulate/
      • MarkovProcess.hs
      • MarkovProcessAlongTree.hs
• test/
  • Files.hs
  • Spec.hs
  • ELynx/
    • Data/
      • Alphabet/
        • DistributionDiversitySpec.hs
      • MarkovProcess/
        • AminoAcidSpec.hs
        • NucleotideSpec.hs
      • Sequence/
        • MultiSequenceAlignmentSpec.hs
        • SequenceSpec.hs
        • TranslateSpec.hs
    • Export/
      • Sequence/
        • FastaSpec.hs
    • Import/
      • MarkovProcess/
        • EDMModelPhylobayesSpec.hs
      • Sequence/
        • FastaSpec.hs
    • Simulate/
      • MarkovProcessAlongTreeSpec.hs