Safe Haskell | None |
---|---|
Language | Haskell2010 |
Monadic Iteratees: incremental input parsers, processors and transformers
Synopsis
- data Stream c
- = EOF (Maybe SomeException)
- | Chunk c
- data StreamStatus
- module Bio.Iteratee.Exception
- newtype Iteratee s m a = Iteratee {}
- run :: Monad m => Iteratee s m a -> m a
- tryRun :: (Exception e, Monad m) => Iteratee s m a -> m (Either e a)
- ilift :: (Monad m, Monad n) => (forall r. m r -> n r) -> Iteratee s m a -> Iteratee s n a
- ifold :: (Monad m, Monad n) => (forall r. m r -> acc -> n (r, acc)) -> acc -> Iteratee s m a -> Iteratee s n (a, acc)
- idone :: a -> Stream s -> Iteratee s m a
- icont :: (Stream s -> Iteratee s m a) -> Maybe SomeException -> Iteratee s m a
- liftI :: (Stream s -> Iteratee s m a) -> Iteratee s m a
- idoneM :: Monad m => a -> Stream s -> m (Iteratee s m a)
- icontM :: Monad m => (Stream s -> Iteratee s m a) -> Maybe SomeException -> m (Iteratee s m a)
- setEOF :: Stream c -> SomeException
- class NullPoint c where
- class NullPoint c => Nullable c where
Types
A stream is a (continuing) sequence of elements bundled in Chunks. The first variant indicates termination of the stream. Chunk a gives the currently available part of the stream. The stream is not terminated yet. The case (null Chunk) signifies a stream with no currently available data but which is still continuing. A stream processor should, informally speaking, ``suspend itself'' and wait for more data to arrive.
EOF (Maybe SomeException) | |
Chunk c |
data StreamStatus Source #
Describe the status of a stream of data.
Instances
Show StreamStatus Source # | |
Defined in Bio.Iteratee.Base showsPrec :: Int -> StreamStatus -> ShowS # show :: StreamStatus -> String # showList :: [StreamStatus] -> ShowS # |
Exception types
module Bio.Iteratee.Exception
Iteratees
newtype Iteratee s m a Source #
Monadic iteratee
Instances
NullPoint s => MonadTrans (Iteratee s) Source # | |
Defined in Bio.Iteratee.Base | |
(Monad m, Nullable s) => Monad (Iteratee s m) Source # | |
Functor m => Functor (Iteratee s m) Source # | |
(Functor m, Monad m, Nullable s) => Applicative (Iteratee s m) Source # | |
Defined in Bio.Iteratee.Base | |
(MonadIO m, Nullable s, NullPoint s) => MonadIO (Iteratee s m) Source # | |
Defined in Bio.Iteratee.Base | |
(MonadThrow m, Nullable s, NullPoint s) => MonadThrow (Iteratee s m) Source # | |
Defined in Bio.Iteratee.Base | |
(MonadCatch m, Nullable s, NullPoint s) => MonadCatch (Iteratee s m) Source # | |
(MonadBracketIO m, Nullable s) => MonadBracketIO (Iteratee s m) Source # | |
Functions
Control functions
run :: Monad m => Iteratee s m a -> m a Source #
Send EOF
to the Iteratee
and disregard the unconsumed part of the
stream. If the iteratee is in an exception state, that exception is
thrown with throw
. Iteratees that do not terminate
on EOF
will throw EofException
.
tryRun :: (Exception e, Monad m) => Iteratee s m a -> m (Either e a) Source #
Run an iteratee, returning either the result or the iteratee exception.
Note that only internal iteratee exceptions will be returned; exceptions
thrown with Control.Exception.throw
or Control.Monad.CatchIO.throw
will
not be returned.
See IFException
for details.
ilift :: (Monad m, Monad n) => (forall r. m r -> n r) -> Iteratee s m a -> Iteratee s n a Source #
Lift a computation in the inner monad of an iteratee.
A simple use would be to lift a logger iteratee to a monad stack.
logger :: Iteratee String IO () logger = mapChunksM_ putStrLn loggerG :: MonadIO m => Iteratee String m () loggerG = ilift liftIO logger
A more complex example would involve lifting an iteratee to work with
interleaved streams. See the example at merge
.
ifold :: (Monad m, Monad n) => (forall r. m r -> acc -> n (r, acc)) -> acc -> Iteratee s m a -> Iteratee s n (a, acc) Source #
Lift a computation in the inner monad of an iteratee, while threading through an accumulator.
Creating Iteratees
icontM :: Monad m => (Stream s -> Iteratee s m a) -> Maybe SomeException -> m (Iteratee s m a) Source #
Stream Functions
setEOF :: Stream c -> SomeException Source #
Produce the EOF
error message. If the stream was terminated because
of an error, keep the error message.
Classes
class NullPoint c where Source #
NullPoint class. Containers that have a null representation, corresponding to Data.Monoid.mempty.
Instances
NullPoint ByteString Source # | |
Defined in Bio.Iteratee.Base emptyP :: ByteString Source # | |
NullPoint ByteString Source # | |
Defined in Bio.Iteratee.Base emptyP :: ByteString Source # | |
NullPoint BgzfChunk Source # | |
Defined in Bio.Iteratee.Bgzf | |
NullPoint Block Source # | |
Defined in Bio.Iteratee.Bgzf | |
NullPoint [a] Source # | |
Defined in Bio.Iteratee.Base | |
NullPoint (Endo a) Source # | |
Defined in Bio.Iteratee.Base |
class NullPoint c => Nullable c where Source #
Nullable container class
Instances
Nullable ByteString Source # | |
Defined in Bio.Iteratee.Base nullC :: ByteString -> Bool Source # | |
Nullable ByteString Source # | |
Defined in Bio.Iteratee.Base nullC :: ByteString -> Bool Source # | |
Nullable BgzfChunk Source # | |
Nullable Block Source # | |
Nullable [a] Source # | |
Defined in Bio.Iteratee.Base | |
Nullable (Endo BgzfTokens) Source # | |
Defined in Bio.Iteratee.Builder |