| Safe Haskell | Safe |
|---|---|
| Language | Haskell98 |
Bio.RNAzData
Description
This module contains a hierarchical data structure for RNAz output For more information on RNAz consult: http://www.tbi.univie.ac.at/~wash/RNAz/
- data RNAz = RNAz {
- version :: String
- sequenceNumber :: Int
- columnNumber :: Int
- readingDirection :: String
- meanPairwiseIdentity :: Double
- shannonEntropy :: Double
- gcContent :: Double
- meanSingleSequenceMinimumFreeEnergy :: Double
- consensusMinimumFreeEnergy :: Double
- energyContribution :: Double
- covarianceContribution :: Double
- combinationsPair :: Double
- meanZScore :: Double
- structureConservationIndex :: Double
- backgroundModel :: String
- decisionModel :: String
- svmDecisionValue :: Double
- svmRNAClassProbability :: Double
- prediction :: String
- rnazResults :: [RNAzResult]
- rnazConsensus :: RNAzConsensus
- data RNAzResult = RNAzResult {}
- data RNAzConsensus = RNAzConsensus {}
Documentation
All elements of RNAz output are contained in this datatype
Constructors
data RNAzResult Source #
Datatype contains all result elements for each member of the input alignment
Constructors
| RNAzResult | |
Fields
| |
Instances
data RNAzConsensus Source #
Datatype contains all elements for the consenus result of input alignment
Constructors
| RNAzConsensus | |
Fields | |
Instances