ViennaRNAParser-1.2.0: Libary for parsing ViennaRNA package output

Safe HaskellSafe-Inferred
LanguageHaskell98

Bio.RNAalifoldData

Description

This module contains a data structure for RNAalifold output For more information on RNAalifold consult: <>

Synopsis

Documentation

data RNAalifold Source

Data structure corrsponds with alifoldoutput redirected to file. Output written directly to commandline also contains number of sequences and length of consensus sequence

Constructors

RNAalifold 

Fields

alignmentConsensusSequence :: String
 
alignmentConsensusDotBracket :: String
 
alignmentConsensusMinimumFreeEnergy :: Double
 
alignmentConsensusInitialMinimumFreeEnergy :: Double
 
alignmentConsensusEnergyCovarianceContributions :: Double
 

Instances