ClustalParser-1.0.0: Libary for parsing Clustal tools output

Safe HaskellSafe
LanguageHaskell98

Bio.ClustalParser

Description

Parse Clustal output

Synopsis

Documentation

parseClustalAlignment :: String -> Either ParseError ClustalAlignment Source

Parse Clustal alignment (.aln) from String

readClustalAlignment :: String -> IO (Either ParseError ClustalAlignment) Source

Parse Clustal alignment (.aln) from filehandle

parseClustalSummary :: String -> Either ParseError ClustalSummary Source

Parse Clustal summary (printed to STDOUT) from String

readClustalSummary :: String -> IO (Either ParseError ClustalSummary) Source

Parse Clustal summary (printed to STDOUT) from file

data ClustalAlignment Source

Data structure for Clustal alignment format