BiobaseTypes-0.1.2.1: Collection of types for bioinformatics

Safe HaskellNone
LanguageHaskell2010

Biobase.Types.Odds

Description

Discretized log-odds.

Synopsis

Documentation

newtype DLO Source #

Discretized log-odds.

The BLOSUM matrices, for example, store data in discretized log-odds form.

TODO Might move up even higher into statistics modules.

Constructors

DLO 

Fields

Instances

Eq DLO Source # 

Methods

(==) :: DLO -> DLO -> Bool #

(/=) :: DLO -> DLO -> Bool #

Ord DLO Source # 

Methods

compare :: DLO -> DLO -> Ordering #

(<) :: DLO -> DLO -> Bool #

(<=) :: DLO -> DLO -> Bool #

(>) :: DLO -> DLO -> Bool #

(>=) :: DLO -> DLO -> Bool #

max :: DLO -> DLO -> DLO #

min :: DLO -> DLO -> DLO #

Read DLO Source # 
Show DLO Source # 

Methods

showsPrec :: Int -> DLO -> ShowS #

show :: DLO -> String #

showList :: [DLO] -> ShowS #

Generic DLO Source # 

Associated Types

type Rep DLO :: * -> * #

Methods

from :: DLO -> Rep DLO x #

to :: Rep DLO x -> DLO #

Hashable DLO Source # 

Methods

hashWithSalt :: Int -> DLO -> Int #

hash :: DLO -> Int #

ToJSON DLO Source # 
FromJSON DLO Source # 
Binary DLO Source # 

Methods

put :: DLO -> Put #

get :: Get DLO #

putList :: [DLO] -> Put #

Serialize DLO Source # 

Methods

put :: Putter DLO #

get :: Get DLO #

NFData DLO Source # 

Methods

rnf :: DLO -> () #

Unbox DLO Source # 
Vector Vector DLO Source # 
MVector MVector DLO Source # 
type Rep DLO Source # 
type Rep DLO = D1 (MetaData "DLO" "Biobase.Types.Odds" "BiobaseTypes-0.1.2.1-1LTYzU1e5OWItpBBqXiV1g" True) (C1 (MetaCons "DLO" PrefixI True) (S1 (MetaSel (Just Symbol "getDLO") NoSourceUnpackedness NoSourceStrictness DecidedLazy) (Rec0 Int)))
data Vector DLO Source # 
data MVector s DLO Source #