Copyright	Michael Thomas
License	GPL-3
Maintainer	Michael Thomas <Michaelt293@gmail.com>
Stability	Experimental
Safe Haskell	None
Language	Haskell2010

Isotope.Ion

Description

This module allows the mass-to-charge ratio and polarity of ions to be calculated.

Synopsis

Documentation

The polarity of a charge. A charge can be either Positive or Negative.

Constructors

Positive
Negative

Instances

Eq Polarity Source #
Methods (==) :: Polarity -> Polarity -> Bool # (/=) :: Polarity -> Polarity -> Bool #
Ord Polarity Source #
Methods compare :: Polarity -> Polarity -> Ordering # (<) :: Polarity -> Polarity -> Bool # (<=) :: Polarity -> Polarity -> Bool # (>) :: Polarity -> Polarity -> Bool # (>=) :: Polarity -> Polarity -> Bool # max :: Polarity -> Polarity -> Polarity # min :: Polarity -> Polarity -> Polarity #
Read Polarity Source #
Methods readsPrec :: Int -> ReadS Polarity # readList :: ReadS [Polarity] # readPrec :: ReadPrec Polarity # readListPrec :: ReadPrec [Polarity] #
Show Polarity Source #
Methods showsPrec :: Int -> Polarity -> ShowS # show :: Polarity -> String # showList :: [Polarity] -> ShowS #

newtype Mz Source #

The mass-to-charge ratio of an ion.

Constructors

Mz
Fields getMz :: Double

Instances

Eq Mz Source #
Methods (==) :: Mz -> Mz -> Bool # (/=) :: Mz -> Mz -> Bool #
Ord Mz Source #
Methods compare :: Mz -> Mz -> Ordering # (<) :: Mz -> Mz -> Bool # (<=) :: Mz -> Mz -> Bool # (>) :: Mz -> Mz -> Bool # (>=) :: Mz -> Mz -> Bool # max :: Mz -> Mz -> Mz # min :: Mz -> Mz -> Mz #
Read Mz Source #
Methods readsPrec :: Int -> ReadS Mz # readList :: ReadS [Mz] # readPrec :: ReadPrec Mz # readListPrec :: ReadPrec [Mz] #
Show Mz Source #
Methods showsPrec :: Int -> Mz -> ShowS # show :: Mz -> String # showList :: [Mz] -> ShowS #

The Ion type class. This type class has two methods: mz and polarity.

Methods

Instances

ToElementalComposition a => Ion (Deprotonated a) Source #
Methods mz :: Deprotonated a -> Mz Source # polarity :: Deprotonated a -> Polarity Source #
ToElementalComposition a => Ion (Protonated a) Source #
Methods mz :: Protonated a -> Mz Source # polarity :: Protonated a -> Polarity Source #

Protonated represents a protonated ion.

Constructors

Instances

Eq a => Eq (Protonated a) Source #
Methods (==) :: Protonated a -> Protonated a -> Bool # (/=) :: Protonated a -> Protonated a -> Bool #
Ord a => Ord (Protonated a) Source #
Methods compare :: Protonated a -> Protonated a -> Ordering # (<) :: Protonated a -> Protonated a -> Bool # (<=) :: Protonated a -> Protonated a -> Bool # (>) :: Protonated a -> Protonated a -> Bool # (>=) :: Protonated a -> Protonated a -> Bool # max :: Protonated a -> Protonated a -> Protonated a # min :: Protonated a -> Protonated a -> Protonated a #
Read a => Read (Protonated a) Source #
Methods readsPrec :: Int -> ReadS (Protonated a) # readList :: ReadS [Protonated a] # readPrec :: ReadPrec (Protonated a) # readListPrec :: ReadPrec [Protonated a] #
Show a => Show (Protonated a) Source #
Methods showsPrec :: Int -> Protonated a -> ShowS # show :: Protonated a -> String # showList :: [Protonated a] -> ShowS #
ToElementalComposition a => ToElementalComposition (Protonated a) Source #
Methods toElementalComposition :: Protonated a -> ElementalComposition Source # charge :: Protonated a -> Maybe Charge Source # monoisotopicMass :: Protonated a -> MonoisotopicMass Source # nominalMass :: Protonated a -> NominalMass Source # averageMass :: Protonated a -> AverageMass Source #
ToElementalComposition a => Ion (Protonated a) Source #
Methods mz :: Protonated a -> Mz Source # polarity :: Protonated a -> Polarity Source #

doublyProtonated takes a type and returns a doubly Protonated ion.

Deprotonated represents a deprotonated ion.

Constructors

Instances

Eq a => Eq (Deprotonated a) Source #
Methods (==) :: Deprotonated a -> Deprotonated a -> Bool # (/=) :: Deprotonated a -> Deprotonated a -> Bool #
Ord a => Ord (Deprotonated a) Source #
Methods compare :: Deprotonated a -> Deprotonated a -> Ordering # (<) :: Deprotonated a -> Deprotonated a -> Bool # (<=) :: Deprotonated a -> Deprotonated a -> Bool # (>) :: Deprotonated a -> Deprotonated a -> Bool # (>=) :: Deprotonated a -> Deprotonated a -> Bool # max :: Deprotonated a -> Deprotonated a -> Deprotonated a # min :: Deprotonated a -> Deprotonated a -> Deprotonated a #
Read a => Read (Deprotonated a) Source #
Methods readsPrec :: Int -> ReadS (Deprotonated a) # readList :: ReadS [Deprotonated a] # readPrec :: ReadPrec (Deprotonated a) # readListPrec :: ReadPrec [Deprotonated a] #
Show a => Show (Deprotonated a) Source #
Methods showsPrec :: Int -> Deprotonated a -> ShowS # show :: Deprotonated a -> String # showList :: [Deprotonated a] -> ShowS #
ToElementalComposition a => ToElementalComposition (Deprotonated a) Source #
Methods toElementalComposition :: Deprotonated a -> ElementalComposition Source # charge :: Deprotonated a -> Maybe Charge Source # monoisotopicMass :: Deprotonated a -> MonoisotopicMass Source # nominalMass :: Deprotonated a -> NominalMass Source # averageMass :: Deprotonated a -> AverageMass Source #
ToElementalComposition a => Ion (Deprotonated a) Source #
Methods mz :: Deprotonated a -> Mz Source # polarity :: Deprotonated a -> Polarity Source #

doublyDeprotonated takes a type and returns a doubly Deprotonated ion.