fasta-0.5.1.3: A simple, mindless parser for fasta files.

Safe HaskellSafe-Inferred
LanguageHaskell98

Data.Fasta.String.Types

Description

Collects all application specific types. Used here for strings.

Synopsis

Documentation

data FastaSequence Source

Constructors

FastaSequence 

Fields

fastaHeader :: String
 
fastaSeq :: String
 

Instances

type Codon = String Source

type Clone = FastaSequence Source

type Germline = FastaSequence Source

type CloneMap = Map (Int, Germline) [Clone] Source

A clone is a collection of sequences derived from a germline with a specific identifier

class ShowFasta a where Source

Methods

showFasta :: a -> String Source

Instances