| Copyright | (c) Andrey Mokhov 2016-2017 |
|---|---|
| License | MIT (see the file LICENSE) |
| Maintainer | andrey.mokhov@gmail.com |
| Stability | experimental |
| Safe Haskell | None |
| Language | Haskell2010 |
Algebra.Graph.AdjacencyMap
Contents
Description
Alga is a library for algebraic construction and manipulation of graphs in Haskell. See this paper for the motivation behind the library, the underlying theory, and implementation details.
This module defines the AdjacencyMap data type, as well as associated
operations and algorithms. AdjacencyMap is an instance of the Graph type
class, which can be used for polymorphic graph construction and manipulation.
Algebra.Graph.IntAdjacencyMap defines adjacency maps specialised to graphs
with Int vertices.
- data AdjacencyMap a
- adjacencyMap :: AdjacencyMap a -> Map a (Set a)
- empty :: AdjacencyMap a
- vertex :: a -> AdjacencyMap a
- edge :: Ord a => a -> a -> AdjacencyMap a
- overlay :: Ord a => AdjacencyMap a -> AdjacencyMap a -> AdjacencyMap a
- connect :: Ord a => AdjacencyMap a -> AdjacencyMap a -> AdjacencyMap a
- vertices :: Ord a => [a] -> AdjacencyMap a
- edges :: Ord a => [(a, a)] -> AdjacencyMap a
- overlays :: Ord a => [AdjacencyMap a] -> AdjacencyMap a
- connects :: Ord a => [AdjacencyMap a] -> AdjacencyMap a
- graph :: Ord a => [a] -> [(a, a)] -> AdjacencyMap a
- fromAdjacencyList :: Ord a => [(a, [a])] -> AdjacencyMap a
- isSubgraphOf :: Ord a => AdjacencyMap a -> AdjacencyMap a -> Bool
- isEmpty :: AdjacencyMap a -> Bool
- hasVertex :: Ord a => a -> AdjacencyMap a -> Bool
- hasEdge :: Ord a => a -> a -> AdjacencyMap a -> Bool
- vertexCount :: Ord a => AdjacencyMap a -> Int
- edgeCount :: Ord a => AdjacencyMap a -> Int
- vertexList :: Ord a => AdjacencyMap a -> [a]
- edgeList :: AdjacencyMap a -> [(a, a)]
- adjacencyList :: AdjacencyMap a -> [(a, [a])]
- vertexSet :: Ord a => AdjacencyMap a -> Set a
- edgeSet :: Ord a => AdjacencyMap a -> Set (a, a)
- postset :: Ord a => a -> AdjacencyMap a -> Set a
- path :: Ord a => [a] -> AdjacencyMap a
- circuit :: Ord a => [a] -> AdjacencyMap a
- clique :: Ord a => [a] -> AdjacencyMap a
- biclique :: Ord a => [a] -> [a] -> AdjacencyMap a
- star :: Ord a => a -> [a] -> AdjacencyMap a
- tree :: Ord a => Tree a -> AdjacencyMap a
- forest :: Ord a => Forest a -> AdjacencyMap a
- removeVertex :: Ord a => a -> AdjacencyMap a -> AdjacencyMap a
- removeEdge :: Ord a => a -> a -> AdjacencyMap a -> AdjacencyMap a
- replaceVertex :: Ord a => a -> a -> AdjacencyMap a -> AdjacencyMap a
- mergeVertices :: Ord a => (a -> Bool) -> a -> AdjacencyMap a -> AdjacencyMap a
- gmap :: (Ord a, Ord b) => (a -> b) -> AdjacencyMap a -> AdjacencyMap b
- induce :: Ord a => (a -> Bool) -> AdjacencyMap a -> AdjacencyMap a
- dfsForest :: Ord a => AdjacencyMap a -> Forest a
- topSort :: Ord a => AdjacencyMap a -> Maybe [a]
- isTopSort :: Ord a => [a] -> AdjacencyMap a -> Bool
- scc :: Ord a => AdjacencyMap a -> AdjacencyMap (Set a)
- data GraphKL a
- getGraph :: GraphKL a -> Graph
- getVertex :: GraphKL a -> Vertex -> a
- graphKL :: Ord a => AdjacencyMap a -> GraphKL a
- fromGraphKL :: Ord a => GraphKL a -> AdjacencyMap a
Data structure
data AdjacencyMap a Source #
The AdjacencyMap data type represents a graph by a map of vertices to
their adjacency sets. We define a law-abiding Num instance as a convenient
notation for working with graphs:
0 == vertex 0 1 + 2 == overlay (vertex 1) (vertex 2) 1 * 2 == connect (vertex 1) (vertex 2) 1 + 2 * 3 == overlay (vertex 1) (connect (vertex 2) (vertex 3)) 1 * (2 + 3) == connect (vertex 1) (overlay (vertex 2) (vertex 3))
The Show instance is defined using basic graph construction primitives:
show (empty :: AdjacencyMap Int) == "empty"
show (1 :: AdjacencyMap Int) == "vertex 1"
show (1 + 2 :: AdjacencyMap Int) == "vertices [1,2]"
show (1 * 2 :: AdjacencyMap Int) == "edge 1 2"
show (1 * 2 * 3 :: AdjacencyMap Int) == "edges [(1,2),(1,3),(2,3)]"
show (1 * 2 + 3 :: AdjacencyMap Int) == "graph [1,2,3] [(1,2)]"The Eq instance satisfies all axioms of algebraic graphs:
overlayis commutative and associative:x + y == y + x x + (y + z) == (x + y) + z
connectis associative and hasemptyas the identity:x * empty == x empty * x == x x * (y * z) == (x * y) * z
connectdistributes overoverlay:x * (y + z) == x * y + x * z (x + y) * z == x * z + y * z
connectcan be decomposed:x * y * z == x * y + x * z + y * z
The following useful theorems can be proved from the above set of axioms.
overlayhasemptyas the identity and is idempotent:x + empty == x empty + x == x x + x == xAbsorption and saturation of
connect:x * y + x + y == x * y x * x * x == x * x
When specifying the time and memory complexity of graph algorithms, n and m will denote the number of vertices and edges in the graph, respectively.
adjacencyMap :: AdjacencyMap a -> Map a (Set a) Source #
The adjacency map of the graph: each vertex is associated with a set of its direct successors.
Basic graph construction primitives
empty :: AdjacencyMap a Source #
Construct the empty graph. Complexity: O(1) time and memory.
isEmptyempty == TruehasVertexx empty == FalsevertexCountempty == 0edgeCountempty == 0
vertex :: a -> AdjacencyMap a Source #
Construct the graph comprising a single isolated vertex. Complexity: O(1) time and memory.
isEmpty(vertex x) == FalsehasVertexx (vertex x) == TruehasVertex1 (vertex 2) == FalsevertexCount(vertex x) == 1edgeCount(vertex x) == 0
edge :: Ord a => a -> a -> AdjacencyMap a Source #
Construct the graph comprising a single edge. Complexity: O(1) time, memory.
edge x y ==connect(vertexx) (vertexy)hasEdgex y (edge x y) == TrueedgeCount(edge x y) == 1vertexCount(edge 1 1) == 1vertexCount(edge 1 2) == 2
overlay :: Ord a => AdjacencyMap a -> AdjacencyMap a -> AdjacencyMap a Source #
Overlay two graphs. This is an idempotent, commutative and associative
operation with the identity empty.
Complexity: O((n + m) * log(n)) time and O(n + m) memory.
isEmpty(overlay x y) ==isEmptyx &&isEmptyyhasVertexz (overlay x y) ==hasVertexz x ||hasVertexz yvertexCount(overlay x y) >=vertexCountxvertexCount(overlay x y) <=vertexCountx +vertexCountyedgeCount(overlay x y) >=edgeCountxedgeCount(overlay x y) <=edgeCountx +edgeCountyvertexCount(overlay 1 2) == 2edgeCount(overlay 1 2) == 0
connect :: Ord a => AdjacencyMap a -> AdjacencyMap a -> AdjacencyMap a Source #
Connect two graphs. This is an associative operation with the identity
empty, which distributes over the overlay and obeys the decomposition axiom.
Complexity: O((n + m) * log(n)) time and O(n + m) memory. Note that the
number of edges in the resulting graph is quadratic with respect to the number
of vertices of the arguments: m = O(m1 + m2 + n1 * n2).
isEmpty(connect x y) ==isEmptyx &&isEmptyyhasVertexz (connect x y) ==hasVertexz x ||hasVertexz yvertexCount(connect x y) >=vertexCountxvertexCount(connect x y) <=vertexCountx +vertexCountyedgeCount(connect x y) >=edgeCountxedgeCount(connect x y) >=edgeCountyedgeCount(connect x y) >=vertexCountx *vertexCountyedgeCount(connect x y) <=vertexCountx *vertexCounty +edgeCountx +edgeCountyvertexCount(connect 1 2) == 2edgeCount(connect 1 2) == 1
vertices :: Ord a => [a] -> AdjacencyMap a Source #
Construct the graph comprising a given list of isolated vertices. Complexity: O(L * log(L)) time and O(L) memory, where L is the length of the given list.
vertices [] ==emptyvertices [x] ==vertexxhasVertexx . vertices ==elemxvertexCount. vertices ==length.nubvertexSet. vertices == Set.fromList
edges :: Ord a => [(a, a)] -> AdjacencyMap a Source #
overlays :: Ord a => [AdjacencyMap a] -> AdjacencyMap a Source #
connects :: Ord a => [AdjacencyMap a] -> AdjacencyMap a Source #
graph :: Ord a => [a] -> [(a, a)] -> AdjacencyMap a Source #
Construct the graph from given lists of vertices V and edges E. The resulting graph contains the vertices V as well as all the vertices referred to by the edges E. Complexity: O((n + m) * log(n)) time and O(n + m) memory.
graph [] [] ==emptygraph [x] [] ==vertexx graph [] [(x,y)] ==edgex y graph vs es ==overlay(verticesvs) (edgeses)
fromAdjacencyList :: Ord a => [(a, [a])] -> AdjacencyMap a Source #
Construct a graph from an adjacency list. Complexity: O((n + m) * log(n)) time and O(n + m) memory.
fromAdjacencyList [] ==emptyfromAdjacencyList [(x, [])] ==vertexx fromAdjacencyList [(x, [y])] ==edgex y fromAdjacencyList .adjacencyList== idoverlay(fromAdjacencyList xs) (fromAdjacencyList ys) == fromAdjacencyList (xs ++ ys)
Relations on graphs
isSubgraphOf :: Ord a => AdjacencyMap a -> AdjacencyMap a -> Bool Source #
The isSubgraphOf function takes two graphs and returns True if the
first graph is a subgraph of the second.
Complexity: O((n + m) * log(n)) time.
isSubgraphOfemptyx == True isSubgraphOf (vertexx)empty== False isSubgraphOf x (overlayx y) == True isSubgraphOf (overlayx y) (connectx y) == True isSubgraphOf (pathxs) (circuitxs) == True
Graph properties
isEmpty :: AdjacencyMap a -> Bool Source #
Check if a graph is empty. Complexity: O(1) time.
isEmptyempty== True isEmpty (overlayemptyempty) == True isEmpty (vertexx) == False isEmpty (removeVertexx $vertexx) == True isEmpty (removeEdgex y $edgex y) == False
hasVertex :: Ord a => a -> AdjacencyMap a -> Bool Source #
Check if a graph contains a given vertex. Complexity: O(log(n)) time.
hasVertex xempty== False hasVertex x (vertexx) == True hasVertex x .removeVertexx == const False
hasEdge :: Ord a => a -> a -> AdjacencyMap a -> Bool Source #
Check if a graph contains a given edge. Complexity: O(log(n)) time.
hasEdge x yempty== False hasEdge x y (vertexz) == False hasEdge x y (edgex y) == True hasEdge x y .removeEdgex y == const False
vertexCount :: Ord a => AdjacencyMap a -> Int Source #
The number of vertices in a graph. Complexity: O(1) time.
vertexCountempty== 0 vertexCount (vertexx) == 1 vertexCount ==length.vertexList
vertexList :: Ord a => AdjacencyMap a -> [a] Source #
edgeList :: AdjacencyMap a -> [(a, a)] Source #
adjacencyList :: AdjacencyMap a -> [(a, [a])] Source #
The sorted adjacency list of a graph. Complexity: O(n + m) time and O(m) memory.
adjacencyListempty== [] adjacencyList (vertexx) == [(x, [])] adjacencyList (edge1 2) == [(1, [2]), (2, [])] adjacencyList (star2 [3,1]) == [(1, []), (2, [1,3]), (3, [])]fromAdjacencyList. adjacencyList == id
Standard families of graphs
path :: Ord a => [a] -> AdjacencyMap a Source #
circuit :: Ord a => [a] -> AdjacencyMap a Source #
clique :: Ord a => [a] -> AdjacencyMap a Source #
biclique :: Ord a => [a] -> [a] -> AdjacencyMap a Source #
star :: Ord a => a -> [a] -> AdjacencyMap a Source #
tree :: Ord a => Tree a -> AdjacencyMap a Source #
The tree graph constructed from a given Tree data structure.
Complexity: O((n + m) * log(n)) time and O(n + m) memory.
forest :: Ord a => Forest a -> AdjacencyMap a Source #
The forest graph constructed from a given Forest data structure.
Complexity: O((n + m) * log(n)) time and O(n + m) memory.
Graph transformation
removeVertex :: Ord a => a -> AdjacencyMap a -> AdjacencyMap a Source #
removeEdge :: Ord a => a -> a -> AdjacencyMap a -> AdjacencyMap a Source #
Remove an edge from a given graph. Complexity: O(log(n)) time.
removeEdge x y (edgex y) ==vertices[x, y] removeEdge x y . removeEdge x y == removeEdge x y removeEdge x y .removeVertexx ==removeVertexx removeEdge 1 1 (1 * 1 * 2 * 2) == 1 * 2 * 2 removeEdge 1 2 (1 * 1 * 2 * 2) == 1 * 1 + 2 * 2
replaceVertex :: Ord a => a -> a -> AdjacencyMap a -> AdjacencyMap a Source #
The function replaces vertex replaceVertex x yx with vertex y in a
given AdjacencyMap. If y already exists, x and y will be merged.
Complexity: O((n + m) * log(n)) time.
replaceVertex x x == id replaceVertex x y (vertexx) ==vertexy replaceVertex x y ==mergeVertices(== x) y
mergeVertices :: Ord a => (a -> Bool) -> a -> AdjacencyMap a -> AdjacencyMap a Source #
Merge vertices satisfying a given predicate with a given vertex. Complexity: O((n + m) * log(n)) time, assuming that the predicate takes O(1) to be evaluated.
mergeVertices (const False) x == id
mergeVertices (== x) y == replaceVertex x y
mergeVertices even 1 (0 * 2) == 1 * 1
mergeVertices odd 1 (3 + 4 * 5) == 4 * 1
gmap :: (Ord a, Ord b) => (a -> b) -> AdjacencyMap a -> AdjacencyMap b Source #
Transform a graph by applying a function to each of its vertices. This is
similar to Functor's fmap but can be used with non-fully-parametric
AdjacencyMap.
Complexity: O((n + m) * log(n)) time.
gmap fempty==emptygmap f (vertexx) ==vertex(f x) gmap f (edgex y) ==edge(f x) (f y) gmap id == id gmap f . gmap g == gmap (f . g)
induce :: Ord a => (a -> Bool) -> AdjacencyMap a -> AdjacencyMap a Source #
Construct the induced subgraph of a given graph by removing the vertices that do not satisfy a given predicate. Complexity: O(m) time, assuming that the predicate takes O(1) to be evaluated.
induce (const True) x == x induce (const False) x ==emptyinduce (/= x) ==removeVertexx induce p . induce q == induce (\x -> p x && q x)isSubgraphOf(induce p x) x == True
Algorithms
dfsForest :: Ord a => AdjacencyMap a -> Forest a Source #
Compute the depth-first search forest of a graph.
forest(dfsForest $edge1 1) ==vertex1forest(dfsForest $edge1 2) ==edge1 2forest(dfsForest $edge2 1) ==vertices[1, 2]isSubgraphOf(forest$ dfsForest x) x == True dfsForest .forest. dfsForest == dfsForest dfsForest $ 3 * (1 + 4) * (1 + 5) == [ Node { rootLabel = 1 , subForest = [ Node { rootLabel = 5 , subForest = [] }]} , Node { rootLabel = 3 , subForest = [ Node { rootLabel = 4 , subForest = [] }]}]
topSort :: Ord a => AdjacencyMap a -> Maybe [a] Source #
Compute the topological sort of a graph or return Nothing if the graph
is cyclic.
topSort (1 * 2 + 3 * 1) == Just [3,1,2]
topSort (1 * 2 + 2 * 1) == Nothing
fmap (flip isTopSort x) (topSort x) /= Just False
scc :: Ord a => AdjacencyMap a -> AdjacencyMap (Set a) Source #
Compute the condensation of a graph, where each vertex corresponds to a strongly-connected component of the original graph.
sccempty==emptyscc (vertexx) ==vertex(Set.singletonx) scc (edgex y) ==edge(Set.singletonx) (Set.singletony) scc (circuit(1:xs)) ==edge(Set.fromList(1:xs)) (Set.fromList(1:xs)) scc (3 * 1 * 4 * 1 * 5) ==edges[ (Set.fromList[1,4], Set.fromList[1,4]) , (Set.fromList[1,4], Set.fromList[5] ) , (Set.fromList[3] , Set.fromList[1,4]) , (Set.fromList[3] , Set.fromList[5] )]
Interoperability with King-Launchbury graphs
GraphKL encapsulates King-Launchbury graphs, which are implemented in
the Data.Graph module of the containers library. If graphKL g == h then
the following holds:
map (getVertexh) (vertices$getGraphh) == Set.toAscList(vertexSetg) map (\(x, y) -> (getVertexh x,getVertexh y)) (edges$getGraphh) ==edgeListg
getGraph :: GraphKL a -> Graph Source #
Array-based graph representation (King and Launchbury, 1995).
graphKL :: Ord a => AdjacencyMap a -> GraphKL a Source #
Build GraphKL from the adjacency map of a graph.
fromGraphKL . graphKL == id
fromGraphKL :: Ord a => GraphKL a -> AdjacencyMap a Source #
Extract the adjacency map of a King-Launchbury graph.
fromGraphKL . graphKL == id