Index

B
1 (Type/Class)	Data.Forest.Static.Align.Linear
2 (Type/Class)	Data.Forest.Static.Align.Affine
Frst
1 (Type/Class)	Data.Forest.Static.Align.Linear
2 (Type/Class)	Data.Forest.Static.Align.Affine
gAlign
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
gDelin
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
gDone
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
gFgap	Data.Forest.Static.Align.Affine
gFinalDone	Data.Forest.Static.Align.Affine
gGlobal
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
gH
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
gIndel
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
gIter
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
gLabolg
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
gPgap	Data.Forest.Static.Align.Affine
gSgap	Data.Forest.Static.Align.Affine
gSiter	Data.Forest.Static.Align.Affine
iTbl	Data.Forest.Static.Align.Affine
lAlign
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
lDelin
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
lDone
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
lFgap	Data.Forest.Static.Align.Affine
lFinalDone	Data.Forest.Static.Align.Affine
lH
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
lIndel
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
lIter
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
lPgap	Data.Forest.Static.Align.Affine
lSgap	Data.Forest.Static.Align.Affine
lSiter	Data.Forest.Static.Align.Affine
OTbl
1 (Type/Class)	Data.Forest.Static.Align.Linear
2 (Type/Class)	Data.Forest.Static.Align.Affine
part
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
Pretty	Data.Forest.Static.Align.Linear
pretty	Data.Forest.Static.Align.Linear
Pretty'	Data.Forest.Static.Align.Affine
pretty'	Data.Forest.Static.Align.Affine
resig
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
run	Data.Forest.Static.Align.Affine
runAlignIO
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
runAlignS
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
runAlignScoreTrees
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
runAlignScoreTreesIO
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
runForward
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
runInside
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
runIO
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
runOutside
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
runS	Data.Forest.Static.Align.Linear
score
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
SigGlobal
1 (Type/Class)	Data.Forest.Static.Align.Linear
2 (Data Constructor)	Data.Forest.Static.Align.Linear
3 (Type/Class)	Data.Forest.Static.Align.Affine
4 (Data Constructor)	Data.Forest.Static.Align.Affine
SigLabolg
1 (Type/Class)	Data.Forest.Static.Align.Linear
2 (Data Constructor)	Data.Forest.Static.Align.Linear
3 (Type/Class)	Data.Forest.Static.Align.Affine
4 (Data Constructor)	Data.Forest.Static.Align.Affine
t11	Data.Forest.Static.Align.Linear
t12	Data.Forest.Static.Align.Linear
t21	Data.Forest.Static.Align.Linear
t22	Data.Forest.Static.Align.Linear
t31	Data.Forest.Static.Align.Linear
t32	Data.Forest.Static.Align.Linear
t41	Data.Forest.Static.Align.Linear
t42	Data.Forest.Static.Align.Linear
t51	Data.Forest.Static.Align.Linear
t52	Data.Forest.Static.Align.Linear
t61	Data.Forest.Static.Align.Linear
t62	Data.Forest.Static.Align.Linear
t71	Data.Forest.Static.Align.Linear
t72	Data.Forest.Static.Align.Linear
Tbl
1 (Type/Class)	Data.Forest.Static.Align.Linear
2 (Type/Class)	Data.Forest.Static.Align.Affine
TblBt
1 (Type/Class)	Data.Forest.Static.Align.Linear
2 (Type/Class)	Data.Forest.Static.Align.Affine
test
1 (Function)	Data.Forest.Static.Align.Linear
2 (Function)	Data.Forest.Static.Align.Affine
Trix
1 (Type/Class)	Data.Forest.Static.Align.Linear
2 (Type/Class)	Data.Forest.Static.Align.Affine
Trox
1 (Type/Class)	Data.Forest.Static.Align.Linear
2 (Type/Class)	Data.Forest.Static.Align.Affine