BlastHTTP: Libary to interface with the NCBI blast REST interface

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Searches for a provided nucleotide or protein sequence with the NCBI Blast REST service and returns a blast result in xml format as BlastResult datatype.

For more information on BLAST refer to: http://blast.ncbi.nlm.nih.gov/Blast.cgi.

Information on the webservice can be found at: http://www.ncbi.nlm.nih.gov/BLAST/developer.shtml.

If you plan to submit more than 20 searches in one session, please look up the Usage Guidelines in the webservice information.

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Biobase
- BLAST
  - Biobase.BLAST.HTTP

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BlastHTTP-1.4.2.tar.gz [browse] (Cabal source package)
Package description (as included in the package)

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Package maintainers

FlorianEggenhofer

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Candidates

1.0.0, 1.0.1, 1.4.0

Versions [RSS]	0.0.1, 1.0.0, 1.0.1, 1.2.0, 1.2.1, 1.3.0, 1.4.0, 1.4.1, 1.4.2
Change log	ChangeLog.md
Dependencies	base (>=4.5 && <5), BiobaseBlast (>=0.3.3 && <0.3.4), BiobaseFasta (>=0.4.0 && <0.4.1), bytestring, conduit, either-unwrap, HTTP, http-conduit, hxt, mtl, network (==2.8.0.0), transformers, zip-archive [details]
Tested with	ghc ==8.8, ghc ==8.10, ghc ==9.0
License	GPL-3.0-only
Copyright	Florian Eggenhofer
Author	Florian Eggenhofer, Christian Hoener zu Siederdissen
Maintainer	egg@informatik.uni-freiburg.de
Category	Bioinformatics
Home page	https://github.com/eggzilla/BlastHTTP
Source repo	head: git clone https://github.com/eggzilla/BlastHTTP this: git clone https://github.com/eggzilla/BlastHTTP/tree/1.4.2(tag 1.4.2)
Uploaded	by FlorianEggenhofer at 2021-06-05T21:19:54Z
Distributions
Reverse Dependencies	2 direct, 0 indirect [details]
Downloads	7677 total (11 in the last 30 days)
Rating	(no votes yet) [estimated by Bayesian average]
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Status	Docs available [build log] Last success reported on 2021-06-05 [all 1 reports]

Readme for BlastHTTP-1.4.2

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BlastHTTP

Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice