// Copyright (C) 2018-2019 Yixuan Qiu // // This Source Code Form is subject to the terms of the Mozilla // Public License v. 2.0. If a copy of the MPL was not distributed // with this file, You can obtain one at https://mozilla.org/MPL/2.0/. #ifndef SYM_EIGS_BASE_H #define SYM_EIGS_BASE_H #include #include // std::vector #include // std::abs, std::pow, std::sqrt #include // std::min, std::copy #include // std::invalid_argument #include "Util/TypeTraits.h" #include "Util/SelectionRule.h" #include "Util/CompInfo.h" #include "Util/SimpleRandom.h" #include "MatOp/internal/ArnoldiOp.h" #include "LinAlg/UpperHessenbergQR.h" #include "LinAlg/TridiagEigen.h" #include "LinAlg/Lanczos.h" namespace Spectra { /// /// \defgroup EigenSolver Eigen Solvers /// /// Eigen solvers for different types of problems. /// /// /// \ingroup EigenSolver /// /// This is the base class for symmetric eigen solvers, mainly for internal use. /// It is kept here to provide the documentation for member functions of concrete eigen solvers /// such as SymEigsSolver and SymEigsShiftSolver. /// template < typename Scalar, int SelectionRule, typename OpType, typename BOpType > class SymEigsBase { private: typedef Eigen::Index Index; typedef Eigen::Matrix Matrix; typedef Eigen::Matrix Vector; typedef Eigen::Array Array; typedef Eigen::Array BoolArray; typedef Eigen::Map MapMat; typedef Eigen::Map MapVec; typedef Eigen::Map MapConstVec; typedef ArnoldiOp ArnoldiOpType; typedef Lanczos LanczosFac; protected: OpType* m_op; // object to conduct matrix operation, // e.g. matrix-vector product const Index m_n; // dimension of matrix A const Index m_nev; // number of eigenvalues requested const Index m_ncv; // dimension of Krylov subspace in the Lanczos method Index m_nmatop; // number of matrix operations called Index m_niter; // number of restarting iterations LanczosFac m_fac; // Lanczos factorization Vector m_ritz_val; // Ritz values private: Matrix m_ritz_vec; // Ritz vectors Vector m_ritz_est; // last row of m_ritz_vec, also called the Ritz estimates BoolArray m_ritz_conv; // indicator of the convergence of Ritz values int m_info; // status of the computation const Scalar m_near_0; // a very small value, but 1.0 / m_near_0 does not overflow // ~= 1e-307 for the "double" type const Scalar m_eps; // the machine precision, ~= 1e-16 for the "double" type const Scalar m_eps23; // m_eps^(2/3), used to test the convergence // Implicitly restarted Lanczos factorization void restart(Index k) { if(k >= m_ncv) return; TridiagQR decomp(m_ncv); Matrix Q = Matrix::Identity(m_ncv, m_ncv); for(Index i = k; i < m_ncv; i++) { // QR decomposition of H-mu*I, mu is the shift decomp.compute(m_fac.matrix_H(), m_ritz_val[i]); // Q -> Q * Qi decomp.apply_YQ(Q); // H -> Q'HQ // Since QR = H - mu * I, we have H = QR + mu * I // and therefore Q'HQ = RQ + mu * I m_fac.compress_H(decomp); } m_fac.compress_V(Q); m_fac.factorize_from(k, m_ncv, m_nmatop); retrieve_ritzpair(); } // Calculates the number of converged Ritz values Index num_converged(Scalar tol) { // thresh = tol * max(m_eps23, abs(theta)), theta for Ritz value Array thresh = tol * m_ritz_val.head(m_nev).array().abs().max(m_eps23); Array resid = m_ritz_est.head(m_nev).array().abs() * m_fac.f_norm(); // Converged "wanted" Ritz values m_ritz_conv = (resid < thresh); return m_ritz_conv.cast().sum(); } // Returns the adjusted nev for restarting Index nev_adjusted(Index nconv) { using std::abs; Index nev_new = m_nev; for(Index i = m_nev; i < m_ncv; i++) if(abs(m_ritz_est[i]) < m_near_0) nev_new++; // Adjust nev_new, according to dsaup2.f line 677~684 in ARPACK nev_new += std::min(nconv, (m_ncv - nev_new) / 2); if(nev_new == 1 && m_ncv >= 6) nev_new = m_ncv / 2; else if(nev_new == 1 && m_ncv > 2) nev_new = 2; if(nev_new > m_ncv - 1) nev_new = m_ncv - 1; return nev_new; } // Retrieves and sorts Ritz values and Ritz vectors void retrieve_ritzpair() { TridiagEigen decomp(m_fac.matrix_H()); const Vector& evals = decomp.eigenvalues(); const Matrix& evecs = decomp.eigenvectors(); SortEigenvalue sorting(evals.data(), evals.size()); std::vector ind = sorting.index(); // For BOTH_ENDS, the eigenvalues are sorted according // to the LARGEST_ALGE rule, so we need to move those smallest // values to the left // The order would be // Largest => Smallest => 2nd largest => 2nd smallest => ... // We keep this order since the first k values will always be // the wanted collection, no matter k is nev_updated (used in restart()) // or is nev (used in sort_ritzpair()) if(SelectionRule == BOTH_ENDS) { std::vector ind_copy(ind); for(Index i = 0; i < m_ncv; i++) { // If i is even, pick values from the left (large values) // If i is odd, pick values from the right (small values) if(i % 2 == 0) ind[i] = ind_copy[i / 2]; else ind[i] = ind_copy[m_ncv - 1 - i / 2]; } } // Copy the Ritz values and vectors to m_ritz_val and m_ritz_vec, respectively for(Index i = 0; i < m_ncv; i++) { m_ritz_val[i] = evals[ind[i]]; m_ritz_est[i] = evecs(m_ncv - 1, ind[i]); } for(Index i = 0; i < m_nev; i++) { m_ritz_vec.col(i).noalias() = evecs.col(ind[i]); } } protected: // Sorts the first nev Ritz pairs in the specified order // This is used to return the final results virtual void sort_ritzpair(int sort_rule) { // First make sure that we have a valid index vector SortEigenvalue sorting(m_ritz_val.data(), m_nev); std::vector ind = sorting.index(); switch(sort_rule) { case LARGEST_ALGE: break; case LARGEST_MAGN: { SortEigenvalue sorting(m_ritz_val.data(), m_nev); ind = sorting.index(); } break; case SMALLEST_ALGE: { SortEigenvalue sorting(m_ritz_val.data(), m_nev); ind = sorting.index(); } break; case SMALLEST_MAGN: { SortEigenvalue sorting(m_ritz_val.data(), m_nev); ind = sorting.index(); } break; default: throw std::invalid_argument("unsupported sorting rule"); } Vector new_ritz_val(m_ncv); Matrix new_ritz_vec(m_ncv, m_nev); BoolArray new_ritz_conv(m_nev); for(Index i = 0; i < m_nev; i++) { new_ritz_val[i] = m_ritz_val[ind[i]]; new_ritz_vec.col(i).noalias() = m_ritz_vec.col(ind[i]); new_ritz_conv[i] = m_ritz_conv[ind[i]]; } m_ritz_val.swap(new_ritz_val); m_ritz_vec.swap(new_ritz_vec); m_ritz_conv.swap(new_ritz_conv); } public: /// \cond SymEigsBase(OpType* op, BOpType* Bop, Index nev, Index ncv) : m_op(op), m_n(m_op->rows()), m_nev(nev), m_ncv(ncv > m_n ? m_n : ncv), m_nmatop(0), m_niter(0), m_fac(ArnoldiOpType(op, Bop), m_ncv), m_info(NOT_COMPUTED), m_near_0(TypeTraits::min() * Scalar(10)), m_eps(Eigen::NumTraits::epsilon()), m_eps23(Eigen::numext::pow(m_eps, Scalar(2.0) / 3)) { if(nev < 1 || nev > m_n - 1) throw std::invalid_argument("nev must satisfy 1 <= nev <= n - 1, n is the size of matrix"); if(ncv <= nev || ncv > m_n) throw std::invalid_argument("ncv must satisfy nev < ncv <= n, n is the size of matrix"); } /// /// Virtual destructor /// virtual ~SymEigsBase() {} /// \endcond /// /// Initializes the solver by providing an initial residual vector. /// /// \param init_resid Pointer to the initial residual vector. /// /// **Spectra** (and also **ARPACK**) uses an iterative algorithm /// to find eigenvalues. This function allows the user to provide the initial /// residual vector. /// void init(const Scalar* init_resid) { // Reset all matrices/vectors to zero m_ritz_val.resize(m_ncv); m_ritz_vec.resize(m_ncv, m_nev); m_ritz_est.resize(m_ncv); m_ritz_conv.resize(m_nev); m_ritz_val.setZero(); m_ritz_vec.setZero(); m_ritz_est.setZero(); m_ritz_conv.setZero(); m_nmatop = 0; m_niter = 0; // Initialize the Lanczos factorization MapConstVec v0(init_resid, m_n); m_fac.init(v0, m_nmatop); } /// /// Initializes the solver by providing a random initial residual vector. /// /// This overloaded function generates a random initial residual vector /// (with a fixed random seed) for the algorithm. Elements in the vector /// follow independent Uniform(-0.5, 0.5) distribution. /// void init() { SimpleRandom rng(0); Vector init_resid = rng.random_vec(m_n); init(init_resid.data()); } /// /// Conducts the major computation procedure. /// /// \param maxit Maximum number of iterations allowed in the algorithm. /// \param tol Precision parameter for the calculated eigenvalues. /// \param sort_rule Rule to sort the eigenvalues and eigenvectors. /// Supported values are /// `Spectra::LARGEST_ALGE`, `Spectra::LARGEST_MAGN`, /// `Spectra::SMALLEST_ALGE` and `Spectra::SMALLEST_MAGN`, /// for example `LARGEST_ALGE` indicates that largest eigenvalues /// come first. Note that this argument is only used to /// **sort** the final result, and the **selection** rule /// (e.g. selecting the largest or smallest eigenvalues in the /// full spectrum) is specified by the template parameter /// `SelectionRule` of SymEigsSolver. /// /// \return Number of converged eigenvalues. /// Index compute(Index maxit = 1000, Scalar tol = 1e-10, int sort_rule = LARGEST_ALGE) { // The m-step Lanczos factorization m_fac.factorize_from(1, m_ncv, m_nmatop); retrieve_ritzpair(); // Restarting Index i, nconv = 0, nev_adj; for(i = 0; i < maxit; i++) { nconv = num_converged(tol); if(nconv >= m_nev) break; nev_adj = nev_adjusted(nconv); restart(nev_adj); } // Sorting results sort_ritzpair(sort_rule); m_niter += i + 1; m_info = (nconv >= m_nev) ? SUCCESSFUL : NOT_CONVERGING; return std::min(m_nev, nconv); } /// /// Returns the status of the computation. /// The full list of enumeration values can be found in \ref Enumerations. /// int info() const { return m_info; } /// /// Returns the number of iterations used in the computation. /// Index num_iterations() const { return m_niter; } /// /// Returns the number of matrix operations used in the computation. /// Index num_operations() const { return m_nmatop; } /// /// Returns the converged eigenvalues. /// /// \return A vector containing the eigenvalues. /// Returned vector type will be `Eigen::Vector`, depending on /// the template parameter `Scalar` defined. /// Vector eigenvalues() const { const Index nconv = m_ritz_conv.cast().sum(); Vector res(nconv); if(!nconv) return res; Index j = 0; for(Index i = 0; i < m_nev; i++) { if(m_ritz_conv[i]) { res[j] = m_ritz_val[i]; j++; } } return res; } /// /// Returns the eigenvectors associated with the converged eigenvalues. /// /// \param nvec The number of eigenvectors to return. /// /// \return A matrix containing the eigenvectors. /// Returned matrix type will be `Eigen::Matrix`, /// depending on the template parameter `Scalar` defined. /// virtual Matrix eigenvectors(Index nvec) const { const Index nconv = m_ritz_conv.cast().sum(); nvec = std::min(nvec, nconv); Matrix res(m_n, nvec); if(!nvec) return res; Matrix ritz_vec_conv(m_ncv, nvec); Index j = 0; for(Index i = 0; i < m_nev && j < nvec; i++) { if(m_ritz_conv[i]) { ritz_vec_conv.col(j).noalias() = m_ritz_vec.col(i); j++; } } res.noalias() = m_fac.matrix_V() * ritz_vec_conv; return res; } /// /// Returns all converged eigenvectors. /// virtual Matrix eigenvectors() const { return eigenvectors(m_nev); } }; } // namespace Spectra #endif // SYM_EIGS_BASE_H