hs-samtools-0.5.0.0: Read and write SAM, BAM, and CRAM files.
Copyright(c) Matthew Mosior 2023
LicenseBSD-style
Maintainermattm.github@gmail.com
Portabilityportable
Safe HaskellSafe-Inferred
LanguageHaskell2010

Data.SAM.Version1_6.Read.Base

Contents

Description

WARNING

This module is considered internal.

The Package Versioning Policy does not apply.

The contents of this module may change in any way whatsoever and without any warning between minor versions of this package.

Authors importing this library are expected to track development closely.

All credit goes to the author(s)/maintainer(s) of the containers library for the above warning text.

Description

This library enables the decoding/encoding of SAM, BAM and CRAM file formats.

Synopsis

Reading

readSAM_V1_6 Source #

Arguments

:: FilePath

Path to SAM file.

-> IO SAM_V1_6 

Read a SAM_V1_6 from a file. The file is checked for errors as it parses the SAM file. See the SAM v1.6 specification documentation.