{-# LANGUAGE FlexibleContexts #-} {- | Module : Numeric.GSL.ODE Copyright : (c) Alberto Ruiz 2010 License : GPL Maintainer : Alberto Ruiz Stability : provisional Solution of ordinary differential equation (ODE) initial value problems. <http://www.gnu.org/software/gsl/manual/html_node/Ordinary-Differential-Equations.html> A simple example: @ import Numeric.GSL.ODE import Numeric.LinearAlgebra import Numeric.LinearAlgebra.Util(mplot) xdot t [x,v] = [v, -0.95*x - 0.1*v] ts = linspace 100 (0,20 :: Double) sol = odeSolve xdot [10,0] ts main = mplot (ts : toColumns sol) @ -} ----------------------------------------------------------------------------- module Numeric.GSL.ODE ( odeSolve, odeSolveV, odeSolveVWith, ODEMethod(..), Jacobian, StepControl(..) ) where import Numeric.LinearAlgebra.HMatrix import Numeric.GSL.Internal import Foreign.Ptr(FunPtr, nullFunPtr, freeHaskellFunPtr) import Foreign.C.Types import System.IO.Unsafe(unsafePerformIO) ------------------------------------------------------------------------- type TVV = TV (TV Res) type TVM = TV (TM Res) type TVVM = TV (TV (TM Res)) type TVVVM = TV (TV (TV (TM Res))) type Jacobian = Double -> Vector Double -> Matrix Double -- | Stepping functions data ODEMethod = RK2 -- ^ Embedded Runge-Kutta (2, 3) method. | RK4 -- ^ 4th order (classical) Runge-Kutta. The error estimate is obtained by halving the step-size. For more efficient estimate of the error, use the embedded methods. | RKf45 -- ^ Embedded Runge-Kutta-Fehlberg (4, 5) method. This method is a good general-purpose integrator. | RKck -- ^ Embedded Runge-Kutta Cash-Karp (4, 5) method. | RK8pd -- ^ Embedded Runge-Kutta Prince-Dormand (8,9) method. | RK2imp Jacobian -- ^ Implicit 2nd order Runge-Kutta at Gaussian points. | RK4imp Jacobian -- ^ Implicit 4th order Runge-Kutta at Gaussian points. | BSimp Jacobian -- ^ Implicit Bulirsch-Stoer method of Bader and Deuflhard. The method is generally suitable for stiff problems. | RK1imp Jacobian -- ^ Implicit Gaussian first order Runge-Kutta. Also known as implicit Euler or backward Euler method. Error estimation is carried out by the step doubling method. | MSAdams -- ^ A variable-coefficient linear multistep Adams method in Nordsieck form. This stepper uses explicit Adams-Bashforth (predictor) and implicit Adams-Moulton (corrector) methods in P(EC)^m functional iteration mode. Method order varies dynamically between 1 and 12. | MSBDF Jacobian -- ^ A variable-coefficient linear multistep backward differentiation formula (BDF) method in Nordsieck form. This stepper uses the explicit BDF formula as predictor and implicit BDF formula as corrector. A modified Newton iteration method is used to solve the system of non-linear equations. Method order varies dynamically between 1 and 5. The method is generally suitable for stiff problems. -- | Adaptive step-size control functions data StepControl = X Double Double -- ^ abs. and rel. tolerance for x(t) | X' Double Double -- ^ abs. and rel. tolerance for x'(t) | XX' Double Double Double Double -- ^ include both via rel. tolerance scaling factors a_x, a_x' | ScXX' Double Double Double Double (Vector Double) -- ^ scale abs. tolerance of x(t) components -- | A version of 'odeSolveV' with reasonable default parameters and system of equations defined using lists. odeSolve :: (Double -> [Double] -> [Double]) -- ^ x'(t,x) -> [Double] -- ^ initial conditions -> Vector Double -- ^ desired solution times -> Matrix Double -- ^ solution odeSolve xdot xi ts = odeSolveV RKf45 hi epsAbs epsRel (l2v xdot) (fromList xi) ts where hi = (ts!1 - ts!0)/100 epsAbs = 1.49012e-08 epsRel = epsAbs l2v f = \t -> fromList . f t . toList -- | A version of 'odeSolveVWith' with reasonable default step control. odeSolveV :: ODEMethod -> Double -- ^ initial step size -> Double -- ^ absolute tolerance for the state vector -> Double -- ^ relative tolerance for the state vector -> (Double -> Vector Double -> Vector Double) -- ^ x'(t,x) -> Vector Double -- ^ initial conditions -> Vector Double -- ^ desired solution times -> Matrix Double -- ^ solution odeSolveV meth hi epsAbs epsRel = odeSolveVWith meth (XX' epsAbs epsRel 1 1) hi -- | Evolution of the system with adaptive step-size control. odeSolveVWith :: ODEMethod -> StepControl -> Double -- ^ initial step size -> (Double -> Vector Double -> Vector Double) -- ^ x'(t,x) -> Vector Double -- ^ initial conditions -> Vector Double -- ^ desired solution times -> Matrix Double -- ^ solution odeSolveVWith method control = odeSolveVWith' m mbj c epsAbs epsRel aX aX' mbsc where (m, mbj) = case method of RK2 -> (0 , Nothing ) RK4 -> (1 , Nothing ) RKf45 -> (2 , Nothing ) RKck -> (3 , Nothing ) RK8pd -> (4 , Nothing ) RK2imp jac -> (5 , Just jac) RK4imp jac -> (6 , Just jac) BSimp jac -> (7 , Just jac) RK1imp jac -> (8 , Just jac) MSAdams -> (9 , Nothing ) MSBDF jac -> (10, Just jac) (c, epsAbs, epsRel, aX, aX', mbsc) = case control of X ea er -> (0, ea, er, 1 , 0 , Nothing) X' ea er -> (0, ea, er, 0 , 1 , Nothing) XX' ea er ax ax' -> (0, ea, er, ax, ax', Nothing) ScXX' ea er ax ax' sc -> (1, ea, er, ax, ax', Just sc) odeSolveVWith' :: CInt -- ^ stepping function -> Maybe (Double -> Vector Double -> Matrix Double) -- ^ optional jacobian -> CInt -- ^ step-size control function -> Double -- ^ absolute tolerance for step-size control -> Double -- ^ relative tolerance for step-size control -> Double -- ^ scaling factor for relative tolerance of x(t) -> Double -- ^ scaling factor for relative tolerance of x'(t) -> Maybe (Vector Double) -- ^ optional scaling for absolute error -> Double -- ^ initial step size -> (Double -> Vector Double -> Vector Double) -- ^ x'(t,x) -> Vector Double -- ^ initial conditions -> Vector Double -- ^ desired solution times -> Matrix Double -- ^ solution odeSolveVWith' method mbjac control epsAbs epsRel aX aX' mbsc h f xiv ts = unsafePerformIO $ do let n = size xiv sc = case mbsc of Just scv -> checkdim1 n scv Nothing -> xiv fp <- mkDoubleVecVecfun (\t -> aux_vTov (checkdim1 n . f t)) jp <- case mbjac of Just jac -> mkDoubleVecMatfun (\t -> aux_vTom (checkdim2 n . jac t)) Nothing -> return nullFunPtr sol <- vec sc $ \sc' -> vec xiv $ \xiv' -> vec (checkTimes ts) $ \ts' -> createMIO (size ts) n (ode_c method control h epsAbs epsRel aX aX' fp jp // sc' // xiv' // ts' ) "ode" freeHaskellFunPtr fp return sol foreign import ccall safe "ode" ode_c :: CInt -> CInt -> Double -> Double -> Double -> Double -> Double -> FunPtr (Double -> TVV) -> FunPtr (Double -> TVM) -> TVVVM ------------------------------------------------------- checkdim1 n v | size v == n = v | otherwise = error $ "Error: "++ show n ++ " components expected in the result of the function supplied to odeSolve" checkdim2 n m | rows m == n && cols m == n = m | otherwise = error $ "Error: "++ show n ++ "x" ++ show n ++ " Jacobian expected in odeSolve" checkTimes ts | size ts > 1 && all (>0) (zipWith subtract ts' (tail ts')) = ts | otherwise = error "odeSolve requires increasing times" where ts' = toList ts