Name: damage-patterns Version: 0.27 Synopsis: analyses substitution patterns in aligned DNA reads Homepage: http://bioinf.eva.mpg.de/damage-patterns License: GPL-2 License-file: LICENSE Author: Udo Stenzel Maintainer: udo_stenzel@eva.mpg.de Category: Graphics Build-type: Custom Description: This diagramming tool was used in number of ancient DNA analyses. It has now being separated and somewhat cleaned up, since apparently it will not be thrown away soon. Data-Files: damage-patterns.1 Cabal-version: >=1.6 -- Tested-With: GHC == 7.10.2 source-repository head type: git location: https://bitbucket.org/ustenzel/damage-patterns.git Flag Chart Description: Enable graphing, not just stats. Default: True Executable damage-patterns Build-depends: array >= 0.4 && < 0.6, base >= 4.2 && < 4.10, biohazard >= 0.6.6 && < 0.7, bytestring >= 0.9 && < 0.11, containers >= 0.4 && < 0.6, directory >= 1.2 && < 2.0, filepath >= 1.3 && < 1.5, iteratee >= 0.8.9.6 && < 0.8.10, transformers >= 0.3 && < 0.6, vector >= 0.9 && < 0.11, vector-th-unbox Ghc-Options: -Wall -auto-all Main-is: damage-patterns.hs Extensions: CPP Other-Modules: StatUtil if flag(Chart) Cpp-Options: -DCHART Other-Modules: Diagrams_Rasterific GraphUtil Build-depends: Chart >= 1.3 && < 2.0, Chart-diagrams >= 1.4 && < 2.0, diagrams-core >= 1.2 && < 2.0, diagrams-lib >= 1.2 && < 2.0, diagrams-rasterific >= 1.3 && < 2.0, diagrams-svg >= 1.3 && < 2.0, JuicyPixels >= 3.1.5 && < 3.3, transformers-compat == 0.4.*, Rasterific >= 0.6.1 && < 0.7