Name: classify-frog Version: 0.2.4.3 License: BSD3 License-File: LICENSE Author: Henning Thielemann Maintainer: Henning Thielemann Homepage: http://code.haskell.org/~thielema/classify-frog/ Category: Bioinformatics Synopsis: Classify sounds produced by Xenopus laevis Description: This program is part of the Xenocall project. Researchers observed that the amount and duration of calls of the African clawed frog (Xenopus laevis) change when exposed to hormonal effective substances. The Xenocall project checks whether this effect can be used as an endpoint in animal tests instead of dissecting animals after the experiments. . An experiment for one substance may produce about 100 hours of audio recordings. It is a very tedious and error-prone work to examine this amount of data visually or by listening. The purpose of this program is to examine the recordings automatically and generate tables with basic statistical parameters. . Read the full report at . Tested-With: GHC==7.4.2, GHC==7.8.4 Cabal-Version: >=1.6 Build-Type: Simple Extra-Source-Files: data/directory-order.txt data/advertisement.gp data/advertisement.sh data/advertisement-hourly.gp Data-Files: model/diclo/hmm-global-supervised.csv model/diclo/hmm-global-unsupervised.csv model/diclo/hmm-growling-supervised.csv model/diclo/hmm-supervised.csv Source-Repository this Tag: 0.2.4.3 Type: darcs Location: http://hub.darcs.net/thielema/classify-frog Source-Repository head Type: darcs Location: http://hub.darcs.net/thielema/classify-frog Flag buildSketch Description: Enable some sketch programs Default: False Flag llvm Description: Enable efficient signal processing using LLVM Default: True Executable classify-frog Main-Is: Main.hs Other-Modules: HiddenMarkovModel HiddenMarkovModel.Hardwired Label Class ClassRecord Durations Evaluation Measurement SpectralDistribution SignalProcessingSpecific SignalProcessing SignalProcessingMethods SignalProcessingOption Sox Audacity Audacity.TrackName Spreadsheet.Formula Spreadsheet.Row Spreadsheet.Palisade Spreadsheet.Format Quantile Time Fourier Arithmetic LabelTrack LabelChain LabelChainShifted LabelPattern Signal Rate Named Parameters Feature Option Hs-Source-Dirs: src Build-Depends: hmm-lapack >=0.4 && <0.5, lapack >=0.3 && <0.4, comfort-array >=0.4 && <0.5, text >=1.1 && <1.3, lazy-csv >=0.5 && <0.6, tagchup >=0.4 && <0.5, xml-basic >=0.1.1 && <0.2, synthesizer-core >=0.7.1 && <0.9, audacity >=0.0.1 && <0.1, soxlib >=0.0 && <0.1, gnuplot >=0.5 && <0.6, parallel >=3.2 && <3.3, pooled-io >=0.0.2 && <0.1, concurrent-split >=0.0 && <0.1, fft >=0.1.8 && <0.2, carray >=0.1.5 && <0.2, storablevector-carray >=0.0 && <0.1, -- for NFData instance storablevector >=0.2.11 && <0.3, storable-record >=0.0 && <0.1, array >=0.4 && <0.6, time >=1.5 && <1.9, shell-utility >=0.0 && <0.1, optparse-applicative >=0.11 && <0.15, filemanip >=0.3.6 && <0.4, pathtype >=0.8 && <0.9, non-empty >=0.3 && <0.4, containers >=0.4 && <0.7, explicit-exception >=0.1.8 && <0.2, transformers >=0.2 && <0.6, bifunctors >=5 && <6, semigroups >=0.8.4.1 && <1.0, utility-ht >=0.0.12 && <0.1, numeric-prelude >=0.4 && <0.5, deepseq >=1.3 && <1.5, base >=4 && <5 If flag(llvm) Hs-Source-Dirs: llvm/yes Other-Modules: SignalProcessingSpecificLLVM SignalProcessingLLVM Build-Depends: synthesizer-llvm >=0.8.2 && <0.9, llvm-extra >=0.8 && <0.9, llvm-tf >=3.0 && <3.2 Else Hs-Source-Dirs: llvm/no GHC-Options: -Wall -fwarn-tabs -fwarn-incomplete-record-updates GHC-Options: -rtsopts -threaded GHC-Prof-Options: -fprof-auto -rtsopts If impl(ghc>=7.0) GHC-Options: -fwarn-unused-do-bind CPP-Options: -DNoImplicitPrelude=RebindableSyntax Extensions: CPP Executable spectral-distribution Main-Is: SpectralDistributionTest.hs Other-Modules: SpectralDistribution SignalProcessing Rate Parameters Hs-Source-Dirs: src If flag(buildSketch) Build-Depends: synthesizer-core, storablevector >=0.2.10 && <0.3, utility-ht, numeric-prelude >=0.4 && <0.5, base >=4 && <5 Else Buildable: False GHC-Options: -Wall -fwarn-tabs -fwarn-incomplete-record-updates -rtsopts If impl(ghc>=7.0) GHC-Options: -fwarn-unused-do-bind