biohazard-1.0.4: bioinformatics support library

Index

!!Bio.Prelude
$Bio.Prelude
$!Bio.Prelude
$=Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
$==Bio.Iteratee, Bio.Bam
$>Bio.Prelude
%Bio.Prelude
&Bio.Prelude
&&Bio.Prelude
&&&Bio.Prelude
*Bio.Prelude
**Bio.Prelude
***Bio.Prelude
*>Bio.Prelude
+Bio.Prelude
++Bio.Prelude
+++Bio.Prelude
-Bio.Prelude
.Bio.Prelude
.&.Bio.Prelude
.|.Bio.Prelude
/Bio.Prelude
/=Bio.Prelude
:!:Bio.Prelude
:*Bio.Bam.Rec, Bio.Bam
:+Bio.Prelude
:->Bio.Adna
:|Bio.Prelude
:~:Bio.Prelude
:~~:Bio.Prelude
<Bio.Prelude
<#>Bio.Util.Numeric
<$Bio.Prelude
<$!>Bio.Prelude
<$>Bio.Prelude
<&>Bio.Prelude
<*Bio.Prelude
<**>Bio.Prelude
<*>Bio.Prelude
<+>Bio.Prelude
<<<Bio.Prelude
<<^Bio.Prelude
<=Bio.Prelude
<=<Bio.Prelude
<>Bio.Prelude
<><Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
<|>Bio.Prelude
=$Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
=<<Bio.Prelude
==Bio.Prelude
>Bio.Prelude
><>Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
>=Bio.Prelude
>=>Bio.Prelude
>>Bio.Prelude
>>=Bio.Prelude
>>>Bio.Prelude
>>^Bio.Prelude
absBio.Prelude
accessModesBio.Prelude
accessTimeBio.Prelude
accessTimeHiResBio.Prelude
acosBio.Prelude
acoshBio.Prelude
addBio.Bam.Regions
addForeignPtrFinalizerBio.Prelude
addForeignPtrFinalizerEnvBio.Prelude
addFragTypeBio.Adna
addIntBio.Bam.Regions
addMVarFinalizerBio.Prelude
addPGBio.Bam.Header, Bio.Bam
adjustEBio.Bam.Rec, Bio.Bam
AlgConstrBio.Prelude
AlgRepBio.Prelude
alignedLengthBio.Bam.Rec, Bio.Bam
AlignmentBio.Adna
alignmentBio.Prelude
alignPtrBio.Prelude
All 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
allBio.Prelude
AllocationLimitExceeded 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
allocationLimitExceededBio.Prelude
allowInterruptBio.Prelude
ALNBio.Adna
alnFromMdBio.Adna
AlreadyExistsBio.Prelude
alreadyExistsErrorTypeBio.Prelude
alreadyInUseErrorTypeBio.Prelude
Alt 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
AlternativeBio.Prelude
alwaysBio.Prelude
alwaysSucceedsBio.Prelude
andBio.Prelude
annotateIOErrorBio.Prelude
Any 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
anyBio.Prelude
apBio.Prelude
appBio.Prelude
appendBio.Prelude
appendFileBio.Prelude
appEndoBio.Prelude
AppendOnWriteBio.Prelude
ApplicativeBio.Prelude
approxRationalBio.Prelude
ArithExceptionBio.Prelude
arrBio.Prelude
ArrayExceptionBio.Prelude
ArrowBio.Prelude
ArrowApplyBio.Prelude
ArrowChoiceBio.Prelude
ArrowLoopBio.Prelude
ArrowMonad 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
ArrowPlusBio.Prelude
ArrowZeroBio.Prelude
asinBio.Prelude
asinhBio.Prelude
assertBio.Prelude
assertErrorBio.Prelude
AssertionFailed 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
asTypeOfBio.Prelude
asumBio.Prelude
AsyncExceptionBio.Prelude
asyncExceptionFromExceptionBio.Prelude
asyncExceptionToExceptionBio.Prelude
AsyncIOAvailableBio.Prelude
atanBio.Prelude
atan2Bio.Prelude
atanhBio.Prelude
atomicallyBio.Prelude
atomicModifyIORefBio.Prelude
atomicModifyIORef'Bio.Prelude
atomicWriteIORefBio.Prelude
a_fragment_typeBio.Adna
a_sequenceBio.Adna
BamEnumerateeBio.Bam.Reader, Bio.Bam
BamHeader 
1 (Type/Class)Bio.Bam.Header, Bio.Bam
2 (Data Constructor)Bio.Bam.Header, Bio.Bam
BamIndex 
1 (Type/Class)Bio.Bam.Index, Bio.Bam
2 (Data Constructor)Bio.Bam.Index, Bio.Bam
BamKey 
1 (Type/Class)Bio.Bam.Header, Bio.Bam
2 (Data Constructor)Bio.Bam.Header, Bio.Bam
BamMeta 
1 (Type/Class)Bio.Bam.Header, Bio.Bam
2 (Data Constructor)Bio.Bam.Header, Bio.Bam
BamOtherShitBio.Bam.Header, Bio.Bam
BamRawBio.Bam.Rec, Bio.Bam
bamRawBio.Bam.Rec, Bio.Bam
BamrawEnumerateeBio.Bam.Reader, Bio.Bam
BamRec 
1 (Type/Class)Bio.Bam.Rec, Bio.Bam
2 (Data Constructor)Bio.Bam.Rec, Bio.Bam
BamSortingBio.Bam.Header, Bio.Bam
BamSQ 
1 (Type/Class)Bio.Bam.Header, Bio.Bam
2 (Data Constructor)Bio.Bam.Header, Bio.Bam
bangBio.Adna
BaseBio.Bam.Pileup
basecompo3Bio.Adna
basecompo5Bio.Adna
BasePileBio.Bam.Pileup
BB 
1 (Type/Class)Bio.Iteratee.Builder
2 (Data Constructor)Bio.Iteratee.Builder
BclArgs 
1 (Type/Class)Bio.Iteratee.Builder
2 (Data Constructor)Bio.Iteratee.Builder
BclNucsAscBio.Iteratee.Builder
BclNucsAscRevBio.Iteratee.Builder
BclNucsBinBio.Iteratee.Builder
BclNucsWideBio.Iteratee.Builder
BclQualsAscBio.Iteratee.Builder
BclQualsAscRevBio.Iteratee.Builder
BclQualsBinBio.Iteratee.Builder
BclSpecialTypeBio.Iteratee.Builder
BestCompressionBio.Iteratee.ZLib
BestSpeedBio.Iteratee.ZLib
BgzfChunkBio.Iteratee.Bgzf
bgzfEofMarkerBio.Iteratee.Bgzf
BgzfTokensBio.Iteratee.Builder
BifunctorBio.Prelude
bimapBio.Prelude
BinBio.Bam.Rec, Bio.Bam
bitBio.Prelude
bitDefaultBio.Prelude
BitsBio.Prelude
bitSizeBio.Prelude
bitSizeMaybeBio.Prelude
Block 
1 (Type/Class)Bio.Iteratee.Bgzf, Bio.Bam.Reader, Bio.Bam
2 (Data Constructor)Bio.Iteratee.Bgzf, Bio.Bam.Reader, Bio.Bam
BlockedIndefinitelyOnMVar 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
blockedIndefinitelyOnMVarBio.Prelude
BlockedIndefinitelyOnSTM 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
blockedIndefinitelyOnSTMBio.Prelude
BlockedOnBlackHoleBio.Prelude
BlockedOnExceptionBio.Prelude
BlockedOnForeignCallBio.Prelude
BlockedOnMVarBio.Prelude
BlockedOnOtherBio.Prelude
BlockedOnSTMBio.Prelude
BlockReasonBio.Prelude
blockSpecialModeBio.Prelude
block_contentsBio.Iteratee.Bgzf, Bio.Bam.Reader, Bio.Bam
block_offsetBio.Iteratee.Bgzf, Bio.Bam.Reader, Bio.Bam
BoolBio.Prelude
boolBio.Prelude
BothBio.TwoBit
BoundedBio.Prelude
bracketBio.Prelude
bracketOnErrorBio.Prelude
bracket_Bio.Prelude
breakBio.Prelude
breakEBio.Iteratee.List, Bio.Iteratee, Bio.Bam
breakStreamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
bufferBio.Iteratee.Builder
BufferErrorBio.Iteratee.ZLib
bwa_cal_maxdiffBio.Adna
ByteCountBio.Prelude
BytesBio.Prelude
byteSwap16Bio.Prelude
byteSwap32Bio.Prelude
byteSwap64Bio.Prelude
b_cigarBio.Bam.Rec, Bio.Bam
b_extsBio.Bam.Rec, Bio.Bam
b_flagBio.Bam.Rec, Bio.Bam
b_isizeBio.Bam.Rec, Bio.Bam
b_mapqBio.Bam.Rec, Bio.Bam
b_mposBio.Bam.Rec, Bio.Bam
b_mrnmBio.Bam.Rec, Bio.Bam
b_posBio.Bam.Rec, Bio.Bam
b_qnameBio.Bam.Rec, Bio.Bam
b_qualBio.Bam.Rec, Bio.Bam
b_rnameBio.Bam.Rec, Bio.Bam
b_seqBio.Bam.Rec, Bio.Bam
b_virtual_offsetBio.Bam.Rec, Bio.Bam
c2wBio.Base, Bio.Prelude
CallStats 
1 (Type/Class)Bio.Bam.Pileup
2 (Data Constructor)Bio.Bam.Pileup
cancelAllBio.Iteratee, Bio.Bam
cannotCompactFunctionBio.Prelude
cannotCompactMutableBio.Prelude
cannotCompactPinnedBio.Prelude
castBio.Prelude
castForeignPtrBio.Prelude
castFunPtrBio.Prelude
castFunPtrToPtrBio.Prelude
castPtrBio.Prelude
castPtrToFunPtrBio.Prelude
castPtrToStablePtrBio.Prelude
castStablePtrToPtrBio.Prelude
catchBio.Prelude
catchesBio.Prelude
catchIOErrorBio.Prelude
catchJustBio.Prelude
catchSTMBio.Prelude
CategoryBio.Prelude
catMaybesBio.Prelude
CBlkCnt 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CBlkSize 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CCc 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CClockId 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CDev 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
ceilingBio.Prelude
CentiBio.Prelude
CFsBlkCnt 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CFsFilCnt 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CGid 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
ChanBio.Prelude
Char 
1 (Type/Class)Bio.Prelude
2 (Data Constructor)Bio.Bam.Rec, Bio.Bam
characterSpecialModeBio.Prelude
CharConstrBio.Prelude
CharRepBio.Prelude
cheap_collapseBio.Bam.Rmdup
cheap_collapse_keepBio.Bam.Rmdup
checkErrBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
check_sortBio.Bam.Rmdup
childHandlerBio.Prelude
chooseBio.Util.Numeric
chrBio.Prelude
ChunkBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
chunkLengthBio.Iteratee.List, Bio.Iteratee, Bio.Bam
CId 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CigarBio.Bam.Rec, Bio.Bam
CigOpBio.Bam.Rec, Bio.Bam
CIno 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
cisBio.Prelude
CKey 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
clampPositionBio.TwoBit
clearBitBio.Prelude
ClockTickBio.Prelude
closeFdBio.Prelude
closeFdWithBio.Prelude
CloseOnExecBio.Prelude
ClosePunctuationBio.Prelude
CMode 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CNlink 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
COff 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CollapseBio.Bam.Rmdup
combineCoordinatesBio.Bam.Reader, Bio.Bam
combineNamesBio.Bam.Reader, Bio.Bam
CompactionFailed 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
compareBio.Prelude
compareNamesBio.Bam.Header, Bio.Bam
comparingBio.Prelude
complBio.Base, Bio.Prelude
complementBio.Prelude
complementBitBio.Prelude
CompleteBio.Adna
ComplexBio.Prelude
complexEntropyBio.Bam.Filter, Bio.Bam
complexSimpleBio.Bam.Filter, Bio.Bam
complMatBio.Adna
complsBio.Base, Bio.Prelude
CompositionStatsBio.Adna
compressBgzfBio.Iteratee.Bgzf, Bio.Bam.Reader, Bio.Bam
compressBgzf'Bio.Iteratee.Bgzf
compressBgzfLvBio.Iteratee.Bgzf
compressBufferSizeBio.Iteratee.ZLib
compressChunkBio.Iteratee.Bgzf
compressDictionaryBio.Iteratee.ZLib
CompressionLevel 
1 (Type/Class)Bio.Iteratee.ZLib
2 (Data Constructor)Bio.Iteratee.ZLib
CompressionStrategyBio.Iteratee.ZLib
compression_levelBio.Iteratee.Bgzf
compressLevelBio.Iteratee.ZLib
compressMemoryLevelBio.Iteratee.ZLib
compressMethodBio.Iteratee.ZLib
CompressParams 
1 (Type/Class)Bio.Iteratee.ZLib
2 (Data Constructor)Bio.Iteratee.ZLib
3 (Type/Class)Bio.Iteratee.Bgzf
4 (Data Constructor)Bio.Iteratee.Bgzf
compressStrategyBio.Iteratee.ZLib
compressWindowBitsBio.Iteratee.ZLib
concatBio.Prelude
concatDefaultInputsBio.Bam.Reader, Bio.Bam
concatInputsBio.Bam.Reader, Bio.Bam
concatMapBio.Prelude
concatMapStreamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
concatMapStreamMBio.Iteratee.List, Bio.Iteratee, Bio.Bam
ConIndexBio.Prelude
conjugateBio.Prelude
ConnectorPunctuationBio.Prelude
Const 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
constBio.Prelude
ConstrBio.Prelude
constrFieldsBio.Prelude
constrFixityBio.Prelude
constrIndexBio.Prelude
ConstrRepBio.Prelude
constrRepBio.Prelude
constrTypeBio.Prelude
cons_collapseBio.Bam.Rmdup
cons_collapse_keepBio.Bam.Rmdup
ControlBio.Prelude
convStreamBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
CoordinateBio.Bam.Header, Bio.Bam
cosBio.Prelude
coshBio.Prelude
countConsumedBio.Iteratee.List, Bio.Iteratee, Bio.Bam
countLeadingZerosBio.Prelude
countTrailingZerosBio.Prelude
CPid 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
createDeviceBio.Prelude
createFileBio.Prelude
createLinkBio.Prelude
createNamedPipeBio.Prelude
createPipeBio.Prelude
createSymbolicLinkBio.Prelude
CRLim 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CSpeed 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CSsize 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CTcflag 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CTimer 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CUid 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
CurrencySymbolBio.Prelude
curryBio.Prelude
cycleBio.Prelude
c_mmapBio.Util.MMap
c_munmapBio.Util.MMap
DamagedBaseBio.Bam.Pileup
DamageModelBio.Adna
DamageParametersBio.Adna
damagePatternsIterBio.Adna
damagePatternsIter2BitBio.Adna
damagePatternsIterMDBio.Adna
DashPunctuationBio.Prelude
DataBio.Prelude
dataCast1Bio.Prelude
dataCast2Bio.Prelude
DataErrorBio.Iteratee.ZLib
DataRemainingBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
DataRepBio.Prelude
DataTypeBio.Prelude
dataTypeConstrsBio.Prelude
dataTypeNameBio.Prelude
dataTypeOfBio.Prelude
dataTypeRepBio.Prelude
DBBio.Bam.Pileup
db_callBio.Bam.Pileup
db_dmg_posBio.Bam.Pileup
db_dmg_tkBio.Bam.Pileup
db_qualBio.Bam.Pileup
db_refBio.Bam.Pileup
Deadlock 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
DeciBio.Prelude
DecimalNumberBio.Prelude
decodeAnyBamBio.Bam.Reader, Bio.Bam
decodeAnyBamFileBio.Bam.Reader, Bio.Bam
decodeAnyBamOrSamBio.Bam.Reader, Bio.Bam
decodeAnyBamOrSamFileBio.Bam.Reader, Bio.Bam
decodeBamBio.Bam.Reader, Bio.Bam
decodeBytesBio.Prelude
decodeFloatBio.Prelude
decodeSamBio.Bam.Reader, Bio.Bam
decodeSam'Bio.Bam.Reader, Bio.Bam
decomposeBio.Bam.Pileup
decompressBgzfBio.Iteratee.Bgzf, Bio.Bam.Reader, Bio.Bam
decompressBgzfBlocksBio.Iteratee.Bgzf, Bio.Bam.Reader, Bio.Bam
decompressBgzfBlocks'Bio.Iteratee.Bgzf
decompressBufferSizeBio.Iteratee.ZLib
decompressDictionaryBio.Iteratee.ZLib
decompressGzipBio.Util.Zlib
DecompressParams 
1 (Type/Class)Bio.Iteratee.ZLib
2 (Data Constructor)Bio.Iteratee.ZLib
decompressPlainBio.Iteratee.Bgzf
decompressWindowBitsBio.Iteratee.ZLib
defaultBufSizeBio.Iteratee.IO, Bio.Iteratee, Bio.Bam
DefaultCompressionBio.Iteratee.ZLib
defaultCompressParamsBio.Iteratee.ZLib
defaultDecompressParamsBio.Iteratee.ZLib
defaultFileFlagsBio.Prelude
DefaultMemoryLevelBio.Iteratee.ZLib
DefaultStrategyBio.Iteratee.ZLib
DefaultWindowBitsBio.Iteratee.ZLib
default_fwd_adaptersBio.Bam.Trim, Bio.Bam
default_rev_adaptersBio.Bam.Trim, Bio.Bam
DeflatedBio.Iteratee.ZLib
DelBio.Bam.Rec, Bio.Bam
Del'Bio.Bam.Rmdup
deleteBio.Prelude
deleteByBio.Prelude
deleted_basesBio.Bam.Pileup
deleteEBio.Bam.Rec, Bio.Bam
deleteFirstsByBio.Prelude
denominatorBio.Prelude
DenormalBio.Prelude
depthBio.Bam.Index, Bio.Bam
deRefStablePtrBio.Prelude
DeviceIDBio.Prelude
deviceIDBio.Prelude
dieBio.Prelude
digitToIntBio.Prelude
directoryModeBio.Prelude
disableAllocationLimitBio.Prelude
displayExceptionBio.Iteratee.Exception, Bio.Prelude, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
distinctBinBio.Bam.Header, Bio.Bam
divBio.Prelude
div'Bio.Prelude
DivergentException 
1 (Type/Class)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
2 (Data Constructor)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
DivideByZeroBio.Prelude
divModBio.Prelude
divMod'Bio.Prelude
DmgStats 
1 (Type/Class)Bio.Adna
2 (Data Constructor)Bio.Adna
DmgToken 
1 (Type/Class)Bio.Bam.Pileup
2 (Data Constructor)Bio.Bam.Pileup
doesNotExistErrorTypeBio.Prelude
DoubleBio.Prelude
Down 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
DPBio.Adna
dp_alphaBio.Adna
dp_alpha3Bio.Adna
dp_alpha5Bio.Adna
dp_betaBio.Adna
dp_beta3Bio.Adna
dp_beta5Bio.Adna
dp_gc_fracBio.Adna
dp_muBio.Adna
dp_nuBio.Adna
dropBio.Prelude
dropStreamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
dropStreamBSBio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
dropWhileBio.Prelude
dropWhileEndBio.Prelude
dropWhileStreamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
dropWhileStreamBSBio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
dsd_deltaBio.Adna
dsd_lambdaBio.Adna
dsd_sigmaBio.Adna
Dual 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
dupBio.Prelude
dupChanBio.Prelude
dupToBio.Prelude
Dynamic 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
dynAppBio.Prelude
dynApplyBio.Prelude
dynTypeRepBio.Prelude
E0Bio.Prelude
E1Bio.Prelude
E12Bio.Prelude
E2Bio.Prelude
E3Bio.Prelude
E6Bio.Prelude
E9Bio.Prelude
ECigBio.Bam.Rmdup
eflagAlternativeBio.Bam.Header, Bio.Bam
eflagExactIndexBio.Bam.Header, Bio.Bam
eflagMergedBio.Bam.Header, Bio.Bam
eflagTrimmedBio.Bam.Header, Bio.Bam
EitherBio.Prelude
eitherBio.Prelude
elemBio.Prelude
elemIndexBio.Prelude
elemIndicesBio.Prelude
empDamageBio.Adna
EmptyBio.Bam.Pileup
emptyBio.Prelude
emptyPBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
emptyQBio.Iteratee, Bio.Bam
enableAllocationLimitBio.Prelude
EnclosingMarkBio.Prelude
encodeBamWithBio.Bam.Writer, Bio.Bam
encodeBgzfBio.Iteratee.Builder
encodeBytesBio.Prelude
encodeFloatBio.Prelude
endBio.Bam.Regions, Bio.Bam.Index, Bio.Bam
EndianBio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
endianRead2Bio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
endianRead3Bio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
endianRead3iBio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
endianRead4Bio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
endianRead8Bio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
Endo 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
EndOfReadBio.Bam.Pileup
eneeBamRefseqBio.Bam.Index, Bio.Bam
eneeBamRegionsBio.Bam.Index, Bio.Bam
eneeBamSubseqBio.Bam.Index, Bio.Bam
eneeBamUnalignedBio.Bam.Index, Bio.Bam
eneeCheckIfDoneBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
eneeCheckIfDoneHandleBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
eneeCheckIfDoneIgnoreBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
eneeCheckIfDonePassBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
enStrExcBio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
ensureIOManagerIsRunningBio.Prelude
EnumBio.Prelude
enumAuxFileBio.Iteratee, Bio.Bam
enumBlockFlushBio.Iteratee.ZLib
enumCheckIfDoneBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
enumChunkBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
enumDefaultInputsBio.Iteratee, Bio.Bam
enumDeflateBio.Iteratee.ZLib
enumEofBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
EnumerateeBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
Enumeratee'Bio.Iteratee, Bio.Bam
EnumerateeHandlerBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
EnumeratorBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
Enumerator'Bio.Iteratee, Bio.Bam
enumErrBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
EnumException 
1 (Type/Class)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
2 (Data Constructor)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
enumFdBio.Iteratee.IO, Bio.Iteratee, Bio.Bam
enumFdRandomBio.Iteratee.IO, Bio.Iteratee, Bio.Bam
enumFileBio.Iteratee.IO, Bio.Iteratee, Bio.Bam
enumFileRandomBio.Iteratee.IO, Bio.Iteratee, Bio.Bam
enumFromBio.Prelude
enumFromCallbackBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
enumFromCallbackCatchBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
enumFromThenBio.Prelude
enumFromThenToBio.Prelude
enumFromToBio.Prelude
enumFullFlushBio.Iteratee.ZLib
enumInflateBio.Iteratee.ZLib
enumInflateAnyBio.Iteratee.ZLib
enumInputsBio.Iteratee, Bio.Bam
enumLinesBSBio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
enumListBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
enumPure1ChunkBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
enumPureNChunkBio.Iteratee.List, Bio.Iteratee, Bio.Bam
EnumStringException 
1 (Type/Class)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
2 (Data Constructor)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
enumSyncFlushBio.Iteratee.ZLib
EnumUnhandledIterException 
1 (Type/Class)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
2 (Data Constructor)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
enumWithBio.Iteratee.List, Bio.Iteratee, Bio.Bam
enumWordsBSBio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
EOFBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
EofErrorBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
eofErrorTypeBio.Prelude
EofException 
1 (Type/Class)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
2 (Data Constructor)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
EofNoErrorBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
EpochTimeBio.Prelude
EQBio.Prelude
EqBio.Prelude
eqStableNameBio.Prelude
eqTBio.Prelude
EqualBio.Iteratee, Bio.Bam
errorBio.Prelude
ErrorCall 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
ErrorCallWithLocationBio.Prelude
errorContextsBio.Iteratee, Bio.Bam
errorMessageBio.Iteratee, Bio.Bam
errorWithoutStackTraceBio.Prelude
estimateComplexityBio.Util.Numeric
evaluateBio.Prelude
evenBio.Prelude
ExceptionBio.Iteratee.Exception, Bio.Prelude, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
exclusiveBio.Prelude
ExitCodeBio.Prelude
ExitFailureBio.Prelude
exitFailureBio.Prelude
ExitSuccessBio.Prelude
exitSuccessBio.Prelude
exitWithBio.Prelude
expBio.Prelude
expandBufferBio.Iteratee.Builder
expm1Bio.Util.Numeric
exponentBio.Prelude
ExtBio.Bam.Rec, Bio.Bam
extAsIntBio.Bam.Rec, Bio.Bam
extAsStringBio.Bam.Rec, Bio.Bam
extendRangeBio.Base, Bio.Prelude
ExtensionsBio.Bam.Rec, Bio.Bam
extensionsBio.Bam.Index, Bio.Bam
failBio.Prelude
FalseBio.Prelude
Fd 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude, Bio.Iteratee, Bio.Bam
fdGetBio.Prelude
FdOptionBio.Prelude
fdPutBio.Prelude
fdPutLazyBio.Prelude
fdReadBio.Prelude
fdReadBufBio.Prelude
fdSeekBio.Prelude
fdToHandleBio.Prelude
fdWriteBio.Prelude
fdWriteBufBio.Prelude
fileAccessBio.Prelude
fileExistBio.Prelude
fileGroupBio.Prelude
FileIDBio.Prelude
fileIDBio.Prelude
FileLockBio.Prelude
FileModeBio.Prelude
fileModeBio.Prelude
FileNameLimitBio.Prelude
FileNamesAreNotTruncatedBio.Prelude
FileOffsetBio.Iteratee.Exception, Bio.Prelude, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
fileOwnerBio.Prelude
FilePathBio.Prelude
fileSizeBio.Prelude
FileSizeBitsBio.Prelude
FileStatusBio.Prelude
fileTypeModesBio.Prelude
fillBufferBio.Iteratee.Builder
filterBio.Prelude
FilteredBio.Iteratee.ZLib
filterMBio.Prelude
filterPairsBio.Bam.Filter, Bio.Bam
filterStreamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
filterStreamMBio.Iteratee.List, Bio.Iteratee, Bio.Bam
finalizeForeignPtrBio.Prelude
FinalizerEnvPtrBio.Prelude
FinalizerPtrBio.Prelude
finallyBio.Prelude
FinalQuoteBio.Prelude
findBio.Prelude
findAuxFileBio.Base, Bio.Prelude
findIndexBio.Prelude
findIndicesBio.Prelude
find_mergeBio.Bam.Trim, Bio.Bam
find_trimBio.Bam.Trim, Bio.Bam
FiniteBitsBio.Prelude
finiteBitSizeBio.Prelude
First 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
firstBio.Prelude
fixBio.Prelude
FixedBio.Prelude
FixIOException 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
FixityBio.Prelude
fixSTBio.Prelude
fixupBwaFlagsBio.Bam.Evan
fixupFlagAbuseBio.Bam.Evan
flagAuxillaryBio.Bam.Header, Bio.Bam
flagDuplicateBio.Bam.Header, Bio.Bam
flagFailsQCBio.Bam.Header, Bio.Bam
flagFirstMateBio.Bam.Header, Bio.Bam
flagMateReversedBio.Bam.Header, Bio.Bam
flagMateUnmappedBio.Bam.Header, Bio.Bam
flagPairedBio.Bam.Header, Bio.Bam
flagProperlyPairedBio.Bam.Header, Bio.Bam
flagReversedBio.Bam.Header, Bio.Bam
flagSecondaryBio.Bam.Header, Bio.Bam
flagSecondMateBio.Bam.Header, Bio.Bam
flagSupplementaryBio.Bam.Header, Bio.Bam
flagUnmappedBio.Bam.Header, Bio.Bam
flipBio.Prelude
Float 
1 (Type/Class)Bio.Prelude
2 (Data Constructor)Bio.Bam.Rec, Bio.Bam
FloatArrBio.Bam.Rec, Bio.Bam
FloatConstrBio.Prelude
floatDigitsBio.Prelude
FloatingBio.Prelude
floatRadixBio.Prelude
floatRangeBio.Prelude
FloatRepBio.Prelude
floatToDigitsBio.Prelude
floorBio.Prelude
fmapBio.Prelude
fmapDefaultBio.Prelude
foldBio.Prelude
FoldableBio.Prelude
foldChunksMBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
foldlBio.Prelude
foldl'Bio.Prelude
foldl1Bio.Prelude
foldl1'Bio.Prelude
foldlMBio.Prelude
foldMBio.Prelude
foldMapBio.Prelude
foldMapDefaultBio.Prelude
foldM_Bio.Prelude
foldrBio.Prelude
foldr'Bio.Prelude
foldr1Bio.Prelude
foldrMBio.Prelude
foldStreamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
foldStreamMBio.Iteratee.List, Bio.Iteratee, Bio.Bam
forBio.Prelude
ForeignPtrBio.Prelude
foreverBio.Prelude
forkFinallyBio.Prelude
forkIOBio.Prelude
forkIOWithUnmaskBio.Prelude
forkOnBio.Prelude
forkOnWithUnmaskBio.Prelude
forkOSBio.Prelude
forkOSWithUnmaskBio.Prelude
forMBio.Prelude
Format 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Iteratee.ZLib
forM_Bio.Prelude
for_Bio.Prelude
FractionalBio.Prelude
FragTypeBio.Adna
freeHaskellFunPtrBio.Prelude
freeStablePtrBio.Prelude
freezeMatsBio.Adna
fromConstrBio.Prelude
fromConstrBBio.Prelude
fromConstrMBio.Prelude
fromDmgTokenBio.Bam.Pileup
fromDynBio.Prelude
fromDynamicBio.Prelude
fromEnumBio.Prelude
fromExceptionBio.Iteratee.Exception, Bio.Prelude, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
fromIntegerBio.Prelude
fromIntegralBio.Prelude
fromIterExceptionBio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
fromJustBio.Prelude
fromLeftBio.Prelude
fromListBio.Bam.Regions
fromMaybeBio.Prelude
fromProbBio.Base, Bio.Prelude
fromQualBio.Base, Bio.Prelude
fromQualRaisedBio.Base, Bio.Prelude
fromRatBio.Prelude
fromRationalBio.Prelude
fromRightBio.Prelude
fromStringBio.Prelude
fstBio.Prelude
fst_npBio.Adna
fullErrorTypeBio.Prelude
FunctorBio.Prelude
FunPtrBio.Prelude
funResultTyBio.Prelude
gapBio.Base, Bio.Prelude
gcastBio.Prelude
gcast1Bio.Prelude
gcast2Bio.Prelude
gcdBio.Prelude
GenDamageParametersBio.Adna
GeneralCategoryBio.Prelude
generalCategoryBio.Prelude
GenericBio.Prelude
genericDropBio.Prelude
genericIndexBio.Prelude
genericLengthBio.Prelude
genericReplicateBio.Prelude
genericSplitAtBio.Prelude
genericTakeBio.Prelude
getAllBio.Prelude
getAllocationCounterBio.Prelude
getAltBio.Prelude
getAnyBio.Prelude
getArgsBio.Prelude
getBamRawBio.Bam.Reader, Bio.Bam
getChanContentsBio.Prelude
getCharBio.Prelude
getChunkBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
getChunksBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
getConstBio.Prelude
getContentsBio.Prelude
getDualBio.Prelude
getEnvBio.Prelude
getEnvironmentBio.Prelude
getExecutablePathBio.Prelude
getFdPathVarBio.Prelude
getFdStatusBio.Prelude
getFileStatusBio.Prelude
getFirstBio.Prelude
getFragmentBio.TwoBit
getFwdSubseqVBio.TwoBit
getFwdSubseqWithBio.TwoBit
getLastBio.Prelude
getLazySubseqBio.TwoBit
getLineBio.Prelude
getLockBio.Prelude
getMaskingStateBio.Prelude
getMdBio.Bam.Rec, Bio.Bam
getMinKeyHBio.Bam.Pileup
getNumCapabilitiesBio.Prelude
getNumProcessorsBio.Prelude
getOffsetBio.Iteratee.Bgzf
getPathVarBio.Prelude
getProductBio.Prelude
getProgNameBio.Prelude
getRandomSeqBio.TwoBit
getRefBio.Bam.Header, Bio.Bam
getSeqLengthBio.TwoBit
getSeqnamesBio.TwoBit
getSubseqBio.TwoBit
getSubseqAsciiBio.TwoBit
getSubseqMaskedBio.TwoBit
getSubseqWithBio.TwoBit
getSumBio.Prelude
getSymbolicLinkStatusBio.Prelude
getUncaughtExceptionHandlerBio.Prelude
getZipListBio.Prelude
get_posBio.Bam.Pileup
get_refseqBio.Bam.Pileup
gfoldlBio.Prelude
GloballyBio.Align
gmapMBio.Prelude
gmapMoBio.Prelude
gmapMpBio.Prelude
gmapQBio.Prelude
gmapQiBio.Prelude
gmapQlBio.Prelude
gmapQrBio.Prelude
gmapTBio.Prelude
groupBio.Prelude
groupByBio.Prelude
GroupedBio.Bam.Header, Bio.Bam
groupExecuteModeBio.Prelude
GroupIDBio.Prelude
groupModesBio.Prelude
groupReadModeBio.Prelude
GroupSortedBio.Bam.Header, Bio.Bam
groupStreamByBio.Iteratee.List, Bio.Iteratee, Bio.Bam
groupStreamOnBio.Iteratee.List, Bio.Iteratee, Bio.Bam
groupWithBio.Prelude
groupWriteModeBio.Prelude
GTBio.Prelude
guardBio.Prelude
gunfoldBio.Prelude
GZipBio.Iteratee.ZLib
GZipOrZlibBio.Iteratee.ZLib
HandleBio.Prelude
handleBio.Prelude
handleJustBio.Prelude
Handler 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
HandlerFunBio.Prelude
handleToFdBio.Prelude
HardBio.TwoBit
HardwareFaultBio.Prelude
hashBio.Prelude
HashableBio.Prelude
HashMapBio.Prelude
HashSetBio.Prelude
hashStableNameBio.Prelude
hashUniqueBio.Prelude
hashWithSaltBio.Prelude
HasPrefixBio.Align
HasResolutionBio.Prelude
hCloseBio.Prelude
hdr_other_shitBio.Bam.Header, Bio.Bam
hdr_sortingBio.Bam.Header, Bio.Bam
hdr_versionBio.Bam.Header, Bio.Bam
headBio.Prelude
headsBio.Iteratee.List, Bio.Iteratee, Bio.Bam
headStreamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
headStreamBSBio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
HeapBio.Bam.Pileup
HeapOverflowBio.Prelude
heapOverflowBio.Prelude
HMaBio.Bam.Rec, Bio.Bam
HMa'Bio.Bam.Rmdup
hPrintBio.Prelude
hPrintfBio.Prelude
hPutStrBio.Prelude
hPutStrLnBio.Prelude
HReflBio.Prelude
HuffmanOnlyBio.Iteratee.ZLib
icontBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
icontMBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
idBio.Prelude
idoneBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
idoneMBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
IExceptionBio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
IFException 
1 (Type/Class)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
2 (Data Constructor)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
ifoldBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
iGetStringBio.Iteratee, Bio.Bam
iliftBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
IllegalOperationBio.Prelude
illegalOperationErrorTypeBio.Prelude
iLookAheadBio.Iteratee, Bio.Bam
imagPartBio.Prelude
InappropriateTypeBio.Prelude
IncorrectCompressionLevelBio.Iteratee.ZLib
IncorrectMemoryLevelBio.Iteratee.ZLib
IncorrectStateBio.Iteratee.ZLib
IncorrectWindowBitsBio.Iteratee.ZLib
IndelBio.Bam.Pileup
IndelPileBio.Bam.Pileup
IndelVariant 
1 (Type/Class)Bio.Bam.Pileup
2 (Data Constructor)Bio.Bam.Pileup
indexBio.Prelude
indexConstrBio.Prelude
IndexOutOfBoundsBio.Prelude
InfixBio.Prelude
initBio.Prelude
InitialQuoteBio.Prelude
initsBio.Prelude
inlineBio.Prelude
InputLineLimitBio.Prelude
InputQueueLimitBio.Prelude
inRangeBio.Prelude
InsBio.Bam.Rec, Bio.Bam
Ins'Bio.Bam.Rmdup
insertBio.Prelude
insertByBio.Prelude
insertEBio.Bam.Rec, Bio.Bam
inserted_basesBio.Bam.Pileup
insideRangeBio.Base, Bio.Prelude
Int 
1 (Type/Class)Bio.Prelude
2 (Data Constructor)Bio.Bam.Rec, Bio.Bam
Int16Bio.Prelude
Int32Bio.Prelude
Int64Bio.Prelude
Int8Bio.Prelude
IntArrBio.Bam.Rec, Bio.Bam
IntConstrBio.Prelude
IntegerBio.Prelude
IntegralBio.Prelude
interactBio.Prelude
intercalateBio.Prelude
InterruptedBio.Prelude
interruptibleBio.Prelude
intersectBio.Prelude
intersectByBio.Prelude
intersectFileModesBio.Prelude
intersperseBio.Prelude
IntMapBio.Prelude
IntPtr 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
intPtrToPtrBio.Prelude
IntRepBio.Prelude
IntSetBio.Prelude
intToDigitBio.Prelude
int_loopBio.Iteratee.Builder
InvalidArgumentBio.Prelude
invalidPosBio.Bam.Header, Bio.Bam
invalidRefseqBio.Bam.Header, Bio.Bam
invnormcdfBio.Util.Numeric
IOBio.Prelude
ioBindBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
ioBind_Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
ioeGetErrorStringBio.Prelude
ioeGetErrorTypeBio.Prelude
ioeGetFileNameBio.Prelude
ioeGetHandleBio.Prelude
ioeGetLocationBio.Prelude
IOError 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
ioErrorBio.Prelude
IOErrorTypeBio.Prelude
ioeSetErrorStringBio.Prelude
ioeSetErrorTypeBio.Prelude
ioeSetFileNameBio.Prelude
ioeSetHandleBio.Prelude
ioeSetLocationBio.Prelude
IOExceptionBio.Prelude
ioExceptionBio.Prelude
ioe_descriptionBio.Prelude
ioe_errnoBio.Prelude
ioe_filenameBio.Prelude
ioe_handleBio.Prelude
ioe_locationBio.Prelude
ioe_typeBio.Prelude
ioManagerCapabilitiesChangedBio.Prelude
IORefBio.Prelude
isAlgTypeBio.Prelude
isAlphaBio.Prelude
isAlphaNumBio.Prelude
isAlreadyExistsErrorBio.Prelude
isAlreadyExistsErrorTypeBio.Prelude
isAlreadyInUseErrorBio.Prelude
isAlreadyInUseErrorTypeBio.Prelude
isAlternativeBio.Bam.Rec, Bio.Bam
isAsciiBio.Prelude
isAsciiLowerBio.Prelude
isAsciiUpperBio.Prelude
isAuxillaryBio.Bam.Rec, Bio.Bam
isBamBio.Bam.Reader, Bio.Bam
isBamOrSamBio.Bam.Reader, Bio.Bam
IsBamRecBio.Bam.Writer, Bio.Bam
isBaseBio.Base, Bio.Prelude
isBgzfBio.Iteratee.Bgzf
isBgzfBamBio.Bam.Reader, Bio.Bam
isBlockDeviceBio.Prelude
isCharacterDeviceBio.Prelude
isControlBio.Prelude
isCurrentThreadBoundBio.Prelude
isDenormalizedBio.Prelude
isDigitBio.Prelude
isDirectoryBio.Prelude
isDoesNotExistErrorBio.Prelude
isDoesNotExistErrorTypeBio.Prelude
isDuplicateBio.Bam.Rec, Bio.Bam
isEmptyMVarBio.Prelude
isEOFErrorBio.Prelude
isEOFErrorTypeBio.Prelude
isExactIndexBio.Bam.Rec, Bio.Bam
isFailsQCBio.Bam.Rec, Bio.Bam
isFinishedBio.Iteratee.List, Bio.Iteratee, Bio.Bam
isFirstMateBio.Bam.Rec, Bio.Bam
isFullErrorBio.Prelude
isFullErrorTypeBio.Prelude
isGapBio.Base, Bio.Prelude
isGzipBio.Iteratee.Bgzf
isGzipBamBio.Bam.Reader, Bio.Bam
isHexDigitBio.Prelude
isIEEEBio.Prelude
isIllegalOperationBio.Prelude
isIllegalOperationErrorTypeBio.Prelude
isInfiniteBio.Prelude
isInfixOfBio.Prelude
isJustBio.Prelude
isKnownMapqBio.Bam.Header, Bio.Bam
isLatin1Bio.Prelude
isLeftBio.Prelude
isLetterBio.Prelude
isLowerBio.Prelude
isMarkBio.Prelude
isMateReversedBio.Bam.Rec, Bio.Bam
isMateUnmappedBio.Bam.Rec, Bio.Bam
isMergedBio.Bam.Rec, Bio.Bam
isNamedPipeBio.Prelude
isNaNBio.Prelude
isNegativeZeroBio.Prelude
isNorepTypeBio.Prelude
isNothingBio.Prelude
isNumberBio.Prelude
isOctDigitBio.Prelude
isPairedBio.Bam.Rec, Bio.Bam
isPermissionErrorBio.Prelude
isPermissionErrorTypeBio.Prelude
isPlainBamBio.Bam.Reader, Bio.Bam
IsPrefixBio.Align
isPrefixOfBio.Prelude
isPrintBio.Prelude
isProperBaseBio.Base, Bio.Prelude
isProperlyPairedBio.Bam.Rec, Bio.Bam
isPunctuationBio.Prelude
isRegularFileBio.Prelude
isReversedBio.Bam.Rec, Bio.Bam
isRightBio.Prelude
isSecondaryBio.Bam.Rec, Bio.Bam
isSecondMateBio.Bam.Rec, Bio.Bam
isSeparatorBio.Prelude
isSignedBio.Prelude
isSocketBio.Prelude
isSpaceBio.Prelude
isStreamFinishedBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
IsStringBio.Prelude
isSubsequenceOfBio.Prelude
isSuffixOfBio.Prelude
isSupplementaryBio.Bam.Rec, Bio.Bam
isSymbolBio.Prelude
isSymbolicLinkBio.Prelude
isTrimmedBio.Bam.Rec, Bio.Bam
isUnmappedBio.Bam.Rec, Bio.Bam
isUpperBio.Prelude
isUserErrorBio.Prelude
isUserErrorTypeBio.Prelude
isValidPosBio.Bam.Header, Bio.Bam
isValidRefseqBio.Bam.Header, Bio.Bam
iterateBio.Prelude
iterate'Bio.Prelude
Iteratee 
1 (Type/Class)Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
2 (Data Constructor)Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
IterException 
1 (Type/Class)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
2 (Data Constructor)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
iterExceptionFromExceptionBio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
iterExceptionToExceptionBio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
iterLoopBio.Iteratee, Bio.Bam
iterStrExcBio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
IterStringException 
1 (Type/Class)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
2 (Data Constructor)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
IxBio.Prelude
joinBio.Prelude
joinIBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
joinIMBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
JustBio.Prelude
killThreadBio.Prelude
Kleisli 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
labelThreadBio.Prelude
Last 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
lastBio.Prelude
lastStreamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
lazyBio.Prelude
LazyBytesBio.Prelude
LazyTextBio.Prelude
lcmBio.Prelude
LeadingBio.Adna
LeftBio.Prelude
leftBio.Prelude
leftAppBio.Prelude
LeftoverChunkBio.Iteratee.Bgzf
leftsBio.Prelude
lengthBio.Prelude
lengthQBio.Iteratee, Bio.Bam
lengthStreamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
LessBio.Iteratee, Bio.Bam
LetterNumberBio.Prelude
lexBio.Prelude
lexDigitsBio.Prelude
lexLitCharBio.Prelude
liftBio.Iteratee, Bio.Bam
liftABio.Prelude
liftA2Bio.Prelude
liftA3Bio.Prelude
liftBlockBio.Iteratee.Bgzf
liftIBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
liftIOBio.Iteratee, Bio.Bam
liftMBio.Prelude
liftM2Bio.Prelude
liftM3Bio.Prelude
liftM4Bio.Prelude
liftM5Bio.Prelude
LimitBio.Prelude
linesBio.Prelude
LineSeparatorBio.Prelude
LinkCountBio.Prelude
linkCountBio.Prelude
LinkLimitBio.Prelude
listToMaybeBio.Prelude
llerpBio.Util.Numeric
LockRequestBio.Prelude
logBio.Prelude
log1mexpBio.Util.Numeric
log1pBio.Util.Numeric
log1pexpBio.Util.Numeric
logBaseBio.Prelude
lookupBio.Prelude
lookupEnvBio.Prelude
lookupSequenceBio.TwoBit
loopBio.Prelude
loop_bcl_specialBio.Iteratee.Builder
LossOfPrecisionBio.Prelude
LowercaseLetterBio.Prelude
LSBBio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
lsumBio.Util.Numeric
LTBio.Prelude
magnitudeBio.Prelude
makeStableNameBio.Prelude
makeVersionBio.Prelude
mallocForeignPtrBio.Prelude
mallocForeignPtrArrayBio.Prelude
mallocForeignPtrArray0Bio.Prelude
mallocForeignPtrBytesBio.Prelude
manyBio.Prelude
mapBio.Prelude
mapAccumLBio.Prelude
mapAccumRBio.Prelude
mapAndUnzipMBio.Prelude
mapChunksBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
mapChunksMBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
mapChunksM_Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
mapExceptionBio.Prelude
mapMBio.Prelude
mapMaybeBio.Prelude
mapMaybeStreamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
mapM_Bio.Prelude
mappendBio.Prelude
mapStreamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
mapStreamMBio.Iteratee.List, Bio.Iteratee, Bio.Bam
mapStreamM_Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
markBio.Iteratee.Builder
mark2Bio.Iteratee.Builder
MaskBio.TwoBit
maskBio.Prelude
MaskedInterruptibleBio.Prelude
MaskedUninterruptibleBio.Prelude
MaskingStateBio.Prelude
mask_Bio.Prelude
MatBio.Bam.Rec, Bio.Bam
Mat'Bio.Bam.Rmdup
Mat44D 
1 (Type/Class)Bio.Adna
2 (Data Constructor)Bio.Adna
MathSymbolBio.Prelude
maxBio.Prelude
maxBlockSizeBio.Iteratee.Bgzf
maxBoundBio.Prelude
maxConstrIndexBio.Prelude
maximumBio.Prelude
maximumByBio.Prelude
MaxMemoryLevelBio.Iteratee.ZLib
MaybeBio.Prelude
maybeBio.Prelude
maybeToListBio.Prelude
mBindBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
mBind_Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
mconcatBio.Prelude
MdDelBio.Bam.Header, Bio.Bam
MdNumBio.Bam.Header, Bio.Bam
MdOpBio.Bam.Header, Bio.Bam
MdRepBio.Bam.Header, Bio.Bam
MemoryErrorBio.Iteratee.ZLib
MemoryLevel 
1 (Type/Class)Bio.Iteratee.ZLib
2 (Data Constructor)Bio.Iteratee.ZLib
memptyBio.Prelude
mergeBamBio.Bam.Trim, Bio.Bam
mergeBlocksBio.TwoBit
mergeByChunksBio.Iteratee.List, Bio.Iteratee, Bio.Bam
mergeDefaultInputsBio.Bam.Reader, Bio.Bam
merged_qualBio.Bam.Trim, Bio.Bam
merged_seqBio.Bam.Trim, Bio.Bam
mergeEnumsBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
mergeEnums'Bio.Iteratee, Bio.Bam
mergeInputsBio.Bam.Reader, Bio.Bam
mergeSortStreamsBio.Iteratee, Bio.Bam
mergeStreamsBio.Iteratee.List, Bio.Iteratee, Bio.Bam
mergeTrimBamBio.Bam.Trim, Bio.Bam
meta_commentBio.Bam.Header, Bio.Bam
meta_hdrBio.Bam.Header, Bio.Bam
meta_other_shitBio.Bam.Header, Bio.Bam
meta_refsBio.Bam.Header, Bio.Bam
MethodBio.Iteratee.ZLib
mfilterBio.Prelude
mfixBio.Prelude
MicroBio.Prelude
MilliBio.Prelude
minBio.Prelude
minBoundBio.Prelude
minimumBio.Prelude
minimumByBio.Prelude
MinMemoryLevelBio.Iteratee.ZLib
minshiftBio.Bam.Index, Bio.Bam
minusPtrBio.Prelude
mkCharConstrBio.Prelude
mkCharTypeBio.Prelude
mkConstrBio.Prelude
mkDataTypeBio.Prelude
MkFixedBio.Prelude
mkFloatTypeBio.Prelude
mkFunTyBio.Prelude
mkIntegralConstrBio.Prelude
mkIntTypeBio.Prelude
mkIOErrorBio.Prelude
mkNoRepTypeBio.Prelude
mkPolarBio.Prelude
mkRealConstrBio.Prelude
mkWeakIORefBio.Prelude
mkWeakMVarBio.Prelude
mkWeakThreadIdBio.Prelude
MMat44D 
1 (Type/Class)Bio.Adna
2 (Data Constructor)Bio.Adna
modBio.Prelude
mod'Bio.Prelude
ModeBio.Align
modificationTimeBio.Prelude
modificationTimeHiResBio.Prelude
ModifierLetterBio.Prelude
ModifierSymbolBio.Prelude
modifyIOErrorBio.Prelude
modifyIORefBio.Prelude
modifyIORef'Bio.Prelude
modifyMVarBio.Prelude
modifyMVarMaskedBio.Prelude
modifyMVarMasked_Bio.Prelude
modifyMVar_Bio.Prelude
modifySTRefBio.Prelude
modifySTRef'Bio.Prelude
MonadBio.Prelude
MonadFixBio.Prelude
MonadIOBio.Iteratee, Bio.Bam
MonadMaskBio.Iteratee, Bio.Bam
MonadPlusBio.Prelude
MonoidBio.Prelude
mplusBio.Prelude
MSBBio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
msumBio.Prelude
MVarBio.Prelude
myersAlignBio.Align
myThreadIdBio.Prelude
mzeroBio.Prelude
NBio.Base, Bio.Prelude
namedPipeModeBio.Prelude
NanoBio.Prelude
NDPBio.Adna
NeedDictionaryBio.Iteratee.ZLib
negateBio.Prelude
NestedAtomically 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
newBufferBio.Iteratee.Builder
newChanBio.Prelude
NewDamageBio.Adna
NewDamageParametersBio.Adna
newEmptyMVarBio.Prelude
newForeignPtrBio.Prelude
newForeignPtrEnvBio.Prelude
newForeignPtr_Bio.Prelude
newIORefBio.Prelude
newMVarBio.Prelude
newQSemBio.Prelude
newQSemNBio.Prelude
newStablePtrBio.Prelude
newStablePtrPrimMVarBio.Prelude
newSTRefBio.Prelude
newTVarBio.Prelude
newTVarIOBio.Prelude
newUniqueBio.Prelude
NoChunkBio.Iteratee.Bgzf
NoCompressionBio.Iteratee.ZLib
nocttyBio.Prelude
noDamageBio.Adna
NodeBio.Bam.Pileup
NoMethodError 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
nonBlockBio.Prelude
NonBlockingReadBio.Prelude
NoneBio.TwoBit
NonEmptyBio.Prelude
NonSpacingMarkBio.Prelude
NonTermination 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
NopBio.Bam.Rec, Bio.Bam
Nop'Bio.Bam.Rmdup
noRefsBio.Bam.Header, Bio.Bam
NoRepBio.Prelude
normalizeToBio.Bam.Rmdup
NoSuchThingBio.Prelude
notBio.Prelude
NotAssignedBio.Prelude
notElemBio.Prelude
NothingBio.Prelude
NotLessBio.Iteratee, Bio.Bam
NPairBio.Adna
npairBio.Adna
NsBio.Base, Bio.Prelude, Bio.Bam.Rec, Bio.Bam
nubBio.Prelude
nubByBio.Prelude
nucABio.Base, Bio.Prelude
nucCBio.Base, Bio.Prelude
nucGBio.Base, Bio.Prelude
NucleotideBio.Base, Bio.Prelude
NucleotidesBio.Base, Bio.Prelude, Bio.Bam.Rec, Bio.Bam
nucsABio.Base, Bio.Prelude
nucsCBio.Base, Bio.Prelude
nucsGBio.Base, Bio.Prelude
nucsNBio.Base, Bio.Prelude
nucsTBio.Base, Bio.Prelude
nucTBio.Base, Bio.Prelude
nucToNucsBio.Base, Bio.Prelude
nudgeBio.Adna
nullBio.Prelude
NullableBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
nullBamRecBio.Bam.Rec, Bio.Bam
nullCBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
nullFileModeBio.Prelude
nullFunPtrBio.Prelude
NullPointBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
nullPtrBio.Prelude
NumBio.Prelude
numCapabilitiesBio.Prelude
numeratorBio.Prelude
numSparksBio.Prelude
oddBio.Prelude
offBio.Iteratee.Builder
OldDamageBio.Adna
onBio.Prelude
onExceptionBio.Prelude
openFdBio.Prelude
OpenFileFlags 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
OpenModeBio.Prelude
OpenPunctuationBio.Prelude
openTwoBitBio.TwoBit
optionalBio.Prelude
orBio.Prelude
OrdBio.Prelude
ordBio.Prelude
OrderingBio.Prelude
Ordering'Bio.Iteratee, Bio.Bam
orElseBio.Prelude
OtherErrorBio.Prelude
otherExecuteModeBio.Prelude
OtherLetterBio.Prelude
otherModesBio.Prelude
OtherNumberBio.Prelude
OtherPunctuationBio.Prelude
otherReadModeBio.Prelude
OtherSymbolBio.Prelude
otherwiseBio.Prelude
otherWriteModeBio.Prelude
OverflowBio.Prelude
overlapsBio.Bam.Regions
ownerExecuteModeBio.Prelude
ownerModesBio.Prelude
ownerReadModeBio.Prelude
ownerWriteModeBio.Prelude
p'check_waitingBio.Bam.Pileup
p'feed_inputBio.Bam.Pileup
p'scan_activeBio.Bam.Pileup
packBamBio.Bam.Writer, Bio.Bam
PadBio.Bam.Rec, Bio.Bam
Pad'Bio.Bam.Rmdup
PairBio.Prelude
parBio.Prelude
ParagraphSeparatorBio.Prelude
parMapChunksIOBio.Iteratee, Bio.Iteratee.Bgzf, Bio.Bam
parRunIOBio.Iteratee, Bio.Bam
parseBamMetaBio.Bam.Header, Bio.Bam
parseBamMetaLineBio.Bam.Header, Bio.Bam
ParseError 
1 (Type/Class)Bio.Iteratee, Bio.Bam
2 (Data Constructor)Bio.Iteratee, Bio.Bam
parseFastqBio.Bam.Fastq, Bio.Bam
parseFastq'Bio.Bam.Fastq, Bio.Bam
parseFastqCassavaBio.Bam.Fastq, Bio.Bam
parserToIterateeBio.Iteratee, Bio.Bam
parseVersionBio.Prelude
partitionBio.Prelude
partitionEithersBio.Prelude
PathNameLimitBio.Prelude
PathVarBio.Prelude
PatternMatchFail 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
peekBio.Prelude
peekByteOffBio.Prelude
peekElemOffBio.Prelude
peekStreamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
peekStreamBSBio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
peekUnalnWord16BEBio.Util.Storable
peekUnalnWord16LEBio.Util.Storable
peekUnalnWord32BEBio.Util.Storable
peekUnalnWord32LEBio.Util.Storable
peekWord8Bio.Util.Storable
performGCBio.Prelude
performMajorGCBio.Prelude
performMinorGCBio.Prelude
PermissionDeniedBio.Prelude
permissionErrorTypeBio.Prelude
permutationsBio.Prelude
phaseBio.Prelude
piBio.Prelude
PicoBio.Prelude
Pile 
1 (Type/Class)Bio.Bam.Pileup
2 (Data Constructor)Bio.Bam.Pileup
Pile'Bio.Bam.Pileup
PileFBio.Bam.Pileup
PileM 
1 (Type/Class)Bio.Bam.Pileup
2 (Data Constructor)Bio.Bam.Pileup
pileupBio.Bam.Pileup
pileup'Bio.Bam.Pileup
pileup''Bio.Bam.Pileup
pipeBamOutputBio.Bam.Writer, Bio.Bam
PipeBufferLimitBio.Prelude
pipeSamOutputBio.Bam.Writer, Bio.Bam
plusForeignPtrBio.Prelude
plusPtrBio.Prelude
pokeBio.Prelude
pokeByteOffBio.Prelude
pokeElemOffBio.Prelude
pokeUnalnWord32LEBio.Util.Storable
polarBio.Prelude
popCountBio.Prelude
popCountDefaultBio.Prelude
popQBio.Iteratee, Bio.Bam
PosBio.Base, Bio.Prelude
PositionBio.Base, Bio.Prelude
PosPrimChunksBio.Bam.Pileup
powBio.Base, Bio.Prelude
PrBio.Base, Bio.Prelude
predBio.Prelude
PrefixBio.Prelude
PrimBaseBio.Bam.Pileup
PrimChunksBio.Bam.Pileup
PrimMVarBio.Prelude
printBio.Prelude
printfBio.Prelude
PrioIOAvailableBio.Prelude
PrivateUseBio.Prelude
ProbBio.Base, Bio.Prelude
Prob'Bio.Base, Bio.Prelude
probToQualBio.Base, Bio.Prelude
ProcessGroupIDBio.Prelude
ProcessIDBio.Prelude
Product 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
productBio.Prelude
progressBamBio.Bam.Rec, Bio.Bam
progressGenBio.Iteratee, Bio.Bam
progressNumBio.Iteratee, Bio.Bam
progressPosBio.Iteratee, Bio.Bam
properBasesBio.Base, Bio.Prelude
properFractionBio.Prelude
protectTermBio.Iteratee, Bio.Bam
ProtocolErrorBio.Prelude
Proxy 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
pseqBio.Prelude
PtrBio.Prelude
ptrToIntPtrBio.Prelude
ptrToWordPtrBio.Prelude
pureBio.Prelude
pushBamBio.Bam.Writer, Bio.Bam
pushQBio.Iteratee, Bio.Bam
putCharBio.Prelude
putMVarBio.Prelude
putStrBio.Prelude
putStrLnBio.Prelude
putTraceMsgBio.Prelude
p_indel_pileBio.Bam.Pileup
p_indel_statBio.Bam.Pileup
p_is_reverseBio.Base, Bio.Prelude
p_posBio.Bam.Pileup
p_refseqBio.Bam.Pileup
p_seqBio.Base, Bio.Prelude
p_snp_pileBio.Bam.Pileup
p_snp_statBio.Bam.Pileup
p_startBio.Base, Bio.Prelude
QBio.Base, Bio.Prelude
QQ 
1 (Type/Class)Bio.Iteratee, Bio.Bam
2 (Data Constructor)Bio.Iteratee, Bio.Bam
QSemBio.Prelude
QSemNBio.Prelude
QualBio.Base, Bio.Prelude
QualFilterBio.Bam.Filter, Bio.Bam
qualityAverageBio.Bam.Filter, Bio.Bam
qualityFromNewIlluminaBio.Bam.Filter, Bio.Bam
qualityFromOldIlluminaBio.Bam.Filter, Bio.Bam
qualityMinimumBio.Bam.Filter, Bio.Bam
qualToProbBio.Base, Bio.Prelude
queryFdOptionBio.Prelude
QuerynameBio.Bam.Header, Bio.Bam
queue_depthBio.Iteratee.Bgzf
quotBio.Prelude
quotRemBio.Prelude
Range 
1 (Type/Class)Bio.Base, Bio.Prelude
2 (Data Constructor)Bio.Base, Bio.Prelude
rangeBio.Prelude
rangeSizeBio.Prelude
RatioBio.Prelude
RationalBio.Prelude
RatioZeroDenominatorBio.Prelude
RawBio.Iteratee.ZLib
raw_dataBio.Bam.Rec, Bio.Bam
ReadBio.Prelude
readBio.Prelude
readBaiIndexBio.Bam.Index, Bio.Bam
readBamIndexBio.Bam.Index, Bio.Bam
readChanBio.Prelude
readConstrBio.Prelude
readDecBio.Prelude
readEitherBio.Prelude
readFileBio.Prelude
readFloatBio.Prelude
readHexBio.Prelude
readIntBio.Prelude
readIOBio.Prelude
readIORefBio.Prelude
readListBio.Prelude
readListPrecBio.Prelude
readLitCharBio.Prelude
readLnBio.Prelude
ReadLockBio.Prelude
readMaybeBio.Prelude
readMdBio.Bam.Header, Bio.Bam
readMVarBio.Prelude
readOctBio.Prelude
ReadOnlyBio.Prelude
ReadPBio.Prelude
readParenBio.Prelude
ReadPrecBio.Prelude
readPrecBio.Prelude
readPrec_to_PBio.Prelude
readPrec_to_SBio.Prelude
readP_to_PrecBio.Prelude
readP_to_SBio.Prelude
ReadSBio.Prelude
readsBio.Prelude
readSignedBio.Prelude
readsPrecBio.Prelude
readSTRefBio.Prelude
readSymbolicLinkBio.Prelude
reads_mapq0Bio.Bam.Pileup
readS_to_PBio.Prelude
readS_to_PrecBio.Prelude
readTabixBio.Bam.Index, Bio.Bam
readTVarBio.Prelude
readTVarIOBio.Prelude
ReadWriteBio.Prelude
read_depthBio.Bam.Pileup
RealBio.Prelude
RealFloatBio.Prelude
RealFracBio.Prelude
realPartBio.Prelude
realToFracBio.Prelude
RealWorldBio.Prelude
RecConError 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
recipBio.Prelude
RecordChunkBio.Iteratee.Bgzf
RecSelError 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
RecUpdError 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
ReflBio.Prelude
RefsBio.Bam.Header, Bio.Bam
Refseq 
1 (Type/Class)Bio.Bam.Header, Bio.Bam
2 (Data Constructor)Bio.Bam.Header, Bio.Bam
refseqBio.Bam.Regions, Bio.Bam.Index, Bio.Bam
refseq_binsBio.Bam.Index, Bio.Bam
refseq_ckpointsBio.Bam.Index, Bio.Bam
Region 
1 (Type/Class)Bio.Bam.Regions, Bio.Bam.Index, Bio.Bam
2 (Data Constructor)Bio.Bam.Regions, Bio.Bam.Index, Bio.Bam
Regions 
1 (Type/Class)Bio.Bam.Regions
2 (Data Constructor)Bio.Bam.Regions
registerDelayBio.Prelude
regularFileModeBio.Prelude
remBio.Prelude
removeLinkBio.Prelude
removeWartsBio.Bam.Evan
renameBio.Prelude
Rep'Bio.Bam.Rmdup
repConstrBio.Prelude
repeatBio.Prelude
replicateBio.Prelude
replicateMBio.Prelude
replicateM_Bio.Prelude
reportErrorBio.Prelude
reportHeapOverflowBio.Prelude
reportStackOverflowBio.Prelude
resolutionBio.Prelude
ResourceBusyBio.Prelude
ResourceExhaustedBio.Prelude
ResourceVanishedBio.Prelude
retryBio.Prelude
returnBio.Prelude
returnABio.Prelude
reverseBio.Prelude
reverseRangeBio.Base, Bio.Prelude
RightBio.Prelude
rightBio.Prelude
rightsBio.Prelude
rmdupBio.Bam.Rmdup
rnfTyConBio.Prelude
rnfTypeRepBio.Prelude
rollBio.Iteratee.List, Bio.Iteratee, Bio.Bam
rotateBio.Prelude
rotateLBio.Prelude
rotateRBio.Prelude
roundBio.Prelude
rtsSupportsBoundThreadsBio.Prelude
runBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
runHandlersBio.Prelude
runInBoundThreadBio.Prelude
runInUnboundThreadBio.Prelude
runIterBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
runKleisliBio.Prelude
runPileMBio.Bam.Pileup
runSparksBio.Prelude
runSTBio.Prelude
r_lengthBio.Base, Bio.Prelude
r_posBio.Base, Bio.Prelude
scalarMatBio.Adna
scaleFloatBio.Prelude
scanlBio.Prelude
scanl'Bio.Prelude
scanl1Bio.Prelude
scanrBio.Prelude
scanr1Bio.Prelude
sconcatBio.Prelude
secondBio.Prelude
SeekBio.Bam.Pileup
seekBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
SeekException 
1 (Type/Class)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
2 (Data Constructor)Bio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
SemigroupBio.Prelude
seqBio.Prelude
SeqidBio.Base, Bio.Prelude
sequenceBio.Prelude
sequenceABio.Prelude
sequenceA_Bio.Prelude
sequenceStreams_Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
sequence_Bio.Prelude
setAllocationCounterBio.Prelude
setBitBio.Prelude
setEnvBio.Prelude
setEOFBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
setFdModeBio.Prelude
setFdOptionBio.Prelude
setFdOwnerAndGroupBio.Prelude
setFdSizeBio.Prelude
setFdTimesHiResBio.Prelude
setFileCreationMaskBio.Prelude
setFileModeBio.Prelude
setFileSizeBio.Prelude
setFileTimesBio.Prelude
setFileTimesHiResBio.Prelude
setGroupIDModeBio.Prelude
setHandlerBio.Prelude
setLockBio.Prelude
setMDBio.Bam.Rmdup
setNumCapabilitiesBio.Prelude
setOwnerAndGroupBio.Prelude
SetOwnerAndGroupIsRestrictedBio.Prelude
setQualFlagBio.Bam.Rec, Bio.Bam
setSymbolicLinkOwnerAndGroupBio.Prelude
setSymbolicLinkTimesHiResBio.Prelude
setUncaughtExceptionHandlerBio.Prelude
setUserIDModeBio.Prelude
shiftBio.Prelude
shiftLBio.Prelude
shiftPositionBio.Base, Bio.Prelude
shiftRBio.Prelude
shiftRangeBio.Base, Bio.Prelude
ShowBio.Prelude
showBio.Prelude
showAlignedBio.Align
showBamMetaBio.Bam.Header, Bio.Bam
showCharBio.Prelude
showConstrBio.Prelude
showEFloatBio.Prelude
showFFloatBio.Prelude
showFFloatAltBio.Prelude
showFixedBio.Prelude
showFloatBio.Prelude
showGFloatBio.Prelude
showGFloatAltBio.Prelude
showHexBio.Prelude
showHFloatBio.Prelude
showIntBio.Prelude
showIntAtBaseBio.Prelude
showListBio.Prelude
showLitCharBio.Prelude
showMdBio.Bam.Header, Bio.Bam
showNucleotideBio.Base, Bio.Prelude
showNucleotidesBio.Base, Bio.Prelude
showNumBio.Util.Numeric
showOctBio.Prelude
showOOMBio.Util.Numeric
showParenBio.Prelude
ShowSBio.Prelude
showsBio.Prelude
showSignedBio.Prelude
showsPrecBio.Prelude
showStringBio.Prelude
showsTypeRepBio.Prelude
showVersionBio.Prelude
SignalBio.Prelude
signalQSemBio.Prelude
signalQSemNBio.Prelude
significandBio.Prelude
signumBio.Prelude
sinBio.Prelude
sinhBio.Prelude
sizeBio.Iteratee.Builder
sizeOfBio.Prelude
skipToEofBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
SMaBio.Bam.Rec, Bio.Bam
SMa'Bio.Bam.Rmdup
sndBio.Prelude
snd_npBio.Adna
socketModeBio.Prelude
SoftBio.TwoBit
someBio.Prelude
SomeAsyncException 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
SomeException 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
sortBio.Prelude
sortByBio.Prelude
sortOnBio.Prelude
sortWithBio.Prelude
SpaceBio.Prelude
SpacingCombiningMarkBio.Prelude
spanBio.Prelude
SpecialChunkBio.Iteratee.Bgzf
specialDeviceIDBio.Prelude
splitAtBio.Prelude
splitTyConAppBio.Prelude
sqrtBio.Prelude
sq_lengthBio.Bam.Header, Bio.Bam
sq_nameBio.Bam.Header, Bio.Bam
sq_other_shitBio.Bam.Header, Bio.Bam
ssd_deltaBio.Adna
ssd_kappaBio.Adna
ssd_lambdaBio.Adna
ssd_sigmaBio.Adna
STBio.Prelude
StableNameBio.Prelude
StablePtrBio.Prelude
StackOverflowBio.Prelude
stackOverflowBio.Prelude
startBio.Bam.Regions, Bio.Bam.Index, Bio.Bam
stats_moreBio.Adna
statusChangeTimeBio.Prelude
statusChangeTimeHiResBio.Prelude
stderrBio.Prelude, Bio.Iteratee, Bio.Bam
stdErrorBio.Prelude
stdFileModeBio.Prelude
stdinBio.Prelude, Bio.Iteratee, Bio.Bam
stdInputBio.Prelude
stdoutBio.Prelude, Bio.Iteratee, Bio.Bam
stdOutputBio.Prelude
stimesBio.Prelude
STM 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
StorableBio.Prelude
StreamBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
stream2listBio.Iteratee.List, Bio.Iteratee, Bio.Bam
stream2streamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
stream2vectorBio.Iteratee, Bio.Bam
stream2vectorNBio.Iteratee, Bio.Bam
StreamErrorBio.Iteratee.ZLib
StreamStatusBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
STRefBio.Prelude
StringBio.Prelude
stripPrefixBio.Prelude
stToIOBio.Prelude
Subsequence 
1 (Type/Class)Bio.Bam.Regions, Bio.Bam.Index, Bio.Bam
2 (Data Constructor)Bio.Bam.Regions, Bio.Bam.Index, Bio.Bam
subsequencesBio.Prelude
SubstBio.Adna
SubstitutionStatsBio.Adna
substs3Bio.Adna
substs3cpgBio.Adna
substs3d3Bio.Adna
substs3d5Bio.Adna
substs3ddBio.Adna
substs5Bio.Adna
substs5cpgBio.Adna
substs5d3Bio.Adna
substs5d5Bio.Adna
substs5ddBio.Adna
subtractBio.Prelude
succBio.Prelude
Sum 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
sumBio.Prelude
sum_mapqBio.Bam.Pileup
sum_mapq_squaredBio.Bam.Pileup
SurrogateBio.Prelude
swapBio.Prelude
swapMVarBio.Prelude
SymbolicLinkLimitBio.Prelude
symbolicLinkModeBio.Prelude
SynchronousWritesBio.Prelude
SyncIOAvailableBio.Prelude
SystemErrorBio.Prelude
tailBio.Prelude
tailsBio.Prelude
takeBio.Prelude
takeFromChunkBio.Iteratee.List, Bio.Iteratee, Bio.Bam
takeMVarBio.Prelude
takeOverlapBio.TwoBit
takeStreamBio.Iteratee.List, Bio.Iteratee, Bio.Bam
takeStreamBSBio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
takeUpToBio.Iteratee.List, Bio.Iteratee, Bio.Bam
takeWhileBio.Prelude
takeWhileEBio.Iteratee.List, Bio.Iteratee, Bio.Bam
tanBio.Prelude
tanhBio.Prelude
TBFBio.TwoBit
tbf_rawBio.TwoBit
tbf_seqsBio.TwoBit
TBSBio.TwoBit
tbs_dna_offsetBio.TwoBit
tbs_dna_sizeBio.TwoBit
tbs_m_blocksBio.TwoBit
tbs_n_blocksBio.TwoBit
testBitBio.Prelude
testBitDefaultBio.Prelude
Text 
1 (Type/Class)Bio.Prelude
2 (Data Constructor)Bio.Bam.Rec, Bio.Bam
ThreadBlockedBio.Prelude
threadCapabilityBio.Prelude
threadDelayBio.Prelude
ThreadDiedBio.Prelude
ThreadFinishedBio.Prelude
ThreadId 
1 (Type/Class)Bio.Prelude
2 (Data Constructor)Bio.Prelude
ThreadKilledBio.Prelude
ThreadRunningBio.Prelude
ThreadStatusBio.Prelude
threadStatusBio.Prelude
threadWaitReadBio.Prelude
threadWaitReadSTMBio.Prelude
threadWaitWriteBio.Prelude
threadWaitWriteSTMBio.Prelude
throwBio.Prelude
throwErrBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
throwIOBio.Prelude
throwRecoverableErrBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
throwSTMBio.Prelude
throwToBio.Prelude
TimeExpiredBio.Prelude
timeoutBio.Prelude
TitlecaseLetterBio.Prelude
TkBclSpecialBio.Iteratee.Builder
TkDecimalBio.Iteratee.Builder
TkDoubleBio.Iteratee.Builder
TkEndBio.Iteratee.Builder
TkEndRecordBio.Iteratee.Builder
TkEndRecordPart1Bio.Iteratee.Builder
TkEndRecordPart2Bio.Iteratee.Builder
TkFloatBio.Iteratee.Builder
TkLowLevelBio.Iteratee.Builder
TkSetMarkBio.Iteratee.Builder
TkStringBio.Iteratee.Builder
TkWord16Bio.Iteratee.Builder
TkWord32Bio.Iteratee.Builder
TkWord8Bio.Iteratee.Builder
toCigarBio.Bam.Rmdup
toConstrBio.Prelude
toDynBio.Prelude
toECigBio.Bam.Rmdup
toEnumBio.Prelude
toExceptionBio.Iteratee.Exception, Bio.Prelude, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
toIntegerBio.Prelude
toIntegralSizedBio.Prelude
toIterExceptionBio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
toList 
1 (Function)Bio.Prelude
2 (Function)Bio.Bam.Regions
toLowerBio.Prelude
toNucleotideBio.Base, Bio.Prelude
toNucleotidesBio.Base, Bio.Prelude
toProbBio.Base, Bio.Prelude
toQualBio.Base, Bio.Prelude
toRationalBio.Prelude
toTitleBio.Prelude
touchFdBio.Prelude
touchFileBio.Prelude
touchForeignPtrBio.Prelude
touchSymbolicLinkBio.Prelude
toUpperBio.Prelude
traceBio.Prelude
traceEventBio.Prelude
traceEventIOBio.Prelude
traceIdBio.Prelude
traceIOBio.Prelude
traceMBio.Prelude
traceMarkerBio.Prelude
traceMarkerIOBio.Prelude
traceShowBio.Prelude
traceShowIdBio.Prelude
traceShowMBio.Prelude
traceStackBio.Prelude
TrailingBio.Adna
transposeBio.Prelude
TraversableBio.Prelude
traverseBio.Prelude
traverse_Bio.Prelude
trimBamBio.Bam.Trim, Bio.Bam
trim_3Bio.Bam.Trim, Bio.Bam
trim_3'Bio.Bam.Trim, Bio.Bam
trim_low_qualityBio.Bam.Trim, Bio.Bam
TrueBio.Prelude
truncBio.Prelude
truncateBio.Prelude
tryBio.Prelude
tryHeadBio.Iteratee.List, Bio.Iteratee, Bio.Bam
tryHeadBSBio.Iteratee.Bytes, Bio.Iteratee, Bio.Bam
tryIOErrorBio.Prelude
tryJustBio.Prelude
tryPutMVarBio.Prelude
tryReadMVarBio.Prelude
tryRunBio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
tryTakeMVarBio.Prelude
TVar 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
TwoBitFileBio.TwoBit
TwoBitSequenceBio.TwoBit
twoMinsBio.Bam.Trim, Bio.Bam
TyConBio.Prelude
tyConFingerprintBio.Prelude
tyConModuleBio.Prelude
tyconModuleBio.Prelude
tyConNameBio.Prelude
tyConPackageBio.Prelude
tyconUQnameBio.Prelude
TypeableBio.Prelude
TypeError 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
typeOfBio.Prelude
typeOf1Bio.Prelude
typeOf2Bio.Prelude
typeOf3Bio.Prelude
typeOf4Bio.Prelude
typeOf5Bio.Prelude
typeOf6Bio.Prelude
typeOf7Bio.Prelude
TypeRepBio.Prelude
typeRepBio.Prelude
typeRepArgsBio.Prelude
typeRepFingerprintBio.Prelude
typeRepTyConBio.Prelude
type_maskBio.Bam.Rec, Bio.Bam
unaln_offBio.Bam.Index, Bio.Bam
unconsBio.Prelude
uncurryBio.Prelude
undefinedBio.Prelude
UndefinedElementBio.Prelude
UnderflowBio.Prelude
UnexpectedBio.Iteratee.ZLib
unfoldConvStreamBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
unfoldConvStreamCheckBio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
unfoldrBio.Prelude
UniBio.Prelude
uninterruptibleMaskBio.Prelude
uninterruptibleMask_Bio.Prelude
unionBio.Prelude
unionByBio.Prelude
unionFileModesBio.Prelude
unionHBio.Bam.Pileup
UniqueBio.Prelude
univDamageBio.Adna
UnknownBio.Bam.Header, Bio.Bam
UnknownDamageBio.Adna
unknownMapqBio.Bam.Header, Bio.Bam
unlessBio.Prelude
unlinesBio.Prelude
UnlockBio.Prelude
UnmaskedBio.Prelude
unNBio.Base, Bio.Prelude
unNsBio.Base, Bio.Prelude, Bio.Bam.Rec, Bio.Bam
UnpackBio.Prelude
unpackBio.Prelude
unpackBamBio.Bam.Rec, Bio.Bam
unPrBio.Base, Bio.Prelude
unQBio.Base, Bio.Prelude
unRefseqBio.Bam.Header, Bio.Bam
unsafeCoerceBio.Prelude
unsafeDupablePerformIOBio.Prelude
unsafeFixIOBio.Prelude
unsafeInterleaveIOBio.Prelude
unsafeIOToSTMBio.Prelude
unsafeMMapFileBio.Util.MMap
unsafePerformIOBio.Prelude
unsafeShiftLBio.Prelude
unsafeShiftRBio.Prelude
UnsatisfiedConstraintsBio.Prelude
unsetEnvBio.Prelude
UnsortedBio.Bam.Header, Bio.Bam
UnsupportedOperationBio.Prelude
unsupportedOperationBio.Prelude
untangleBio.Prelude
untilBio.Prelude
unwordsBio.Prelude
unwrapArrowBio.Prelude
unwrapMonadBio.Prelude
unzipBio.Prelude
unzip3Bio.Prelude
unzip4Bio.Prelude
unzip5Bio.Prelude
unzip6Bio.Prelude
unzip7Bio.Prelude
updateEBio.Bam.Rec, Bio.Bam
upd_posBio.Bam.Pileup
UppercaseLetterBio.Prelude
usedBio.Iteratee.Builder
UserErrorBio.Prelude
userErrorBio.Prelude
userErrorTypeBio.Prelude
UserIDBio.Prelude
UserInterruptBio.Prelude
VDisableCharBio.Prelude
Vector_Nucs_halfBio.Bam.Rec, Bio.Bam
Version 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
versionBranchBio.Prelude
VersionErrorBio.Iteratee.ZLib
versionTagsBio.Prelude
viewMinHBio.Bam.Pileup
virt_offsetBio.Bam.Rec, Bio.Bam
voidBio.Prelude
V_Nuc 
1 (Type/Class)Bio.Bam.Pileup
2 (Data Constructor)Bio.Bam.Pileup
V_Nucs 
1 (Type/Class)Bio.Bam.Pileup
2 (Data Constructor)Bio.Bam.Pileup
w2cBio.Base, Bio.Prelude
waitQSemBio.Prelude
waitQSemNBio.Prelude
waitToSetLockBio.Prelude
whenBio.Prelude
wilsonBio.Util.Numeric
WindowBits 
1 (Type/Class)Bio.Iteratee.ZLib
2 (Data Constructor)Bio.Iteratee.ZLib
withArgsBio.Prelude
withFdBio.Prelude
withFileFdBio.Iteratee, Bio.Bam
withForeignPtrBio.Prelude
WithMDBio.Bam.Rmdup
withMVarBio.Prelude
withMVarMaskedBio.Prelude
WithoutMDBio.Bam.Rmdup
withProgNameBio.Prelude
WordBio.Prelude
Word16Bio.Prelude
Word32Bio.Prelude, Bio.Bam.Rec, Bio.Bam
Word64Bio.Prelude
Word8Bio.Base, Bio.Prelude
WordPtr 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
wordPtrToPtrBio.Prelude
wordsBio.Prelude
WrapArrowBio.Prelude
wrapIterExcBio.Iteratee.Exception, Bio.Iteratee.Base, Bio.Iteratee.Iteratee, Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
WrapMonadBio.Prelude
WrappedArrowBio.Prelude
WrappedMonadBio.Prelude
wrapRangeBio.Base, Bio.Prelude
wrapToBio.Bam.Rmdup
writeBamFileBio.Bam.Writer, Bio.Bam
writeBamHandleBio.Bam.Writer, Bio.Bam
writeChanBio.Prelude
writeFileBio.Prelude
writeIORefBio.Prelude
writeList2ChanBio.Prelude
WriteLockBio.Prelude
WriteOnlyBio.Prelude
writeSTRefBio.Prelude
writeTVarBio.Prelude
xorBio.Prelude
yieldBio.Prelude
yieldPileBio.Bam.Pileup
zeroArrowBio.Prelude
zeroBitsBio.Prelude
zipBio.Prelude
zip3Bio.Prelude
zip4Bio.Prelude
zip5Bio.Prelude
zip6Bio.Prelude
zip7Bio.Prelude
ZipList 
1 (Data Constructor)Bio.Prelude
2 (Type/Class)Bio.Prelude
zipStreamsBio.Iteratee.List, Bio.Iteratee, Bio.Bam
zipStreams3Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
zipStreams4Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
zipStreams5Bio.Iteratee.List, Bio.Iteratee, Bio.Bam
zipWithBio.Prelude
zipWith3Bio.Prelude
zipWith4Bio.Prelude
zipWith5Bio.Prelude
zipWith6Bio.Prelude
zipWith7Bio.Prelude
zipWithMBio.Prelude
zipWithM_Bio.Prelude
ZlibBio.Iteratee.ZLib
ZLibExceptionBio.Iteratee.ZLib
ZLibParamsExceptionBio.Iteratee.ZLib
\\Bio.Prelude
^Bio.Prelude
^<<Bio.Prelude
^>>Bio.Prelude
^^Bio.Prelude
_pb_baseBio.Bam.Pileup
_pb_chunksBio.Bam.Pileup
_pb_mapqBio.Bam.Pileup
_pb_waitBio.Bam.Pileup
||Bio.Prelude
|||Bio.Prelude