ViennaRNAParser-1.3.3: Libary for parsing ViennaRNA package output

Safe HaskellSafe
LanguageHaskell98

Bio.RNAfoldParser

Description

Parse RNAfold output For more information on RNAfold consult: http://www.tbi.univie.ac.at/RNA/RNAfold

Synopsis

Documentation

systemRNAfold :: String -> String -> IO ExitCode Source #

Run external RNAfold command and read the output into the corresponding datatype

parseRNAfold :: [Char] -> Either ParseError RNAfold Source #

parse RNAfold output from input string

readRNAfold :: String -> IO (Either ParseError RNAfold) Source #

parse RNAfold output from input filePath

systemRNAfoldOptions :: String -> String -> String -> IO ExitCode Source #

Run external RNAfold command and read the output into the corresponding datatype

parseRNAMEAfold :: [Char] -> Either ParseError RNAfoldMEA Source #

parse RNAfold output from input string

readRNAMEAfold :: String -> IO (Either ParseError RNAfoldMEA) Source #

parse RNAfold output from input filePath