sequence-formats: A package with basic parsing utilities for several Bioinformatic data formats.
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Contains utilities to parse and write Eigenstrat, Fasta, FreqSum, VCF and other file formats used in population genetics analyses.
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Properties
| Versions | 1.1.4.1, 1.1.4.1, 1.3.1, 1.3.2, 1.3.2.1, 1.3.3, 1.4.0, 1.4.0.1, 1.4.1, 1.5.0, 1.5.1, 1.5.1.1, 1.5.1.2, 1.5.1.3, 1.5.1.4, 1.5.2, 1.6.0, 1.6.1, 1.6.3, 1.6.6.0, 1.6.6.1, 1.6.7.0, 1.7.0, 1.7.1, 1.8.0.0, 1.8.0.1 |
|---|---|
| Change log | Changelog.md |
| Dependencies | attoparsec (>=0.13.2.2 && <0.14), base (>=4.7 && <5), bytestring (>=0.10.8.2 && <0.11), containers (>=0.5.10.2 && <0.6), data-memocombinators (>=0.5.1 && <0.6), errors (>=2.2.2 && <2.3), exceptions (>=0.8.3 && <0.9), foldl (>=1.3.7 && <1.4), hslogger (>=1.2.10 && <1.3), lens-family (>=1.2.2 && <1.3), MissingH (>=1.4.0.1 && <1.5), pipes (>=4.3.7 && <4.4), pipes-attoparsec (>=0.5.1.5 && <0.6), pipes-bytestring (>=2.1.6 && <2.2), pipes-safe (>=2.2.6 && <2.3), pipes-text (>=0.0.2.5 && <0.1), split (>=0.2.3.3 && <0.3), text (>=1.2.2.2 && <1.3), transformers (>=0.5.2.0 && <0.6), turtle (>=1.4.5 && <1.5), vector (>=0.12.0.1 && <0.13) [details] |
| License | GPL-3.0-only |
| Author | Stephan Schiffels |
| Maintainer | stephan.schiffels@mac.com |
| Category | Bioinformatics |
| Uploaded | by stephan_schiffels at 2019-03-05T14:02:50Z |
Modules
- SequenceFormats
- SequenceFormats.Eigenstrat
- SequenceFormats.Fasta
- SequenceFormats.FreqSum
- SequenceFormats.RareAlleleHistogram
- SequenceFormats.Utils
- SequenceFormats.VCF
Downloads
- sequence-formats-1.1.4.1.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
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