seqloc-datafiles: Read and write BED and GTF format genome annotations
Read and write BED and GTF format genome annotations
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- seqloc-datafiles-0.4.2.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
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Versions [RSS] | 0.1, 0.1.1, 0.2, 0.2.1, 0.2.1.1, 0.2.2, 0.2.2.1, 0.2.2.2, 0.4, 0.4.2 |
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Dependencies | attoparsec (>=0.8.5), base (>=4.2 && <5), biocore (>=0.2), bytestring, cmdtheline, conduit, conduit-extra, filepath, hashable, iteratee (>=0.8.1), lifted-base (>=0.2.3), monads-tf, pretty, QuickCheck, random, resourcet, seqloc (>=0.6), transformers, transformers-base (>=0.4.3), unordered-containers, vector [details] |
License | MIT |
Author | Nick Ingolia |
Maintainer | nick@ingolia.org |
Category | Bioinformatics |
Home page | http://www.ingolia-lab.org/seqloc-datafiles-tutorial.html |
Source repo | head: git clone http://github.com/ingolia/seqloc(seqloc-datafiles) |
Uploaded | by NicholasIngolia at 2015-03-20T20:32:37Z |
Distributions | |
Reverse Dependencies | 1 direct, 0 indirect [details] |
Executables | genome-to-trx, bed-subregion, gtf-introns, bed-to-gtf, gtf-to-bed |
Downloads | 6930 total (15 in the last 30 days) |
Rating | (no votes yet) [estimated by Bayesian average] |
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Status | Docs available [build log] Last success reported on 2015-03-20 [all 1 reports] |