| Safe Haskell | None |
|---|---|
| Language | Haskell98 |
Bio.PDB.StructureBuilder
Description
Front-end module presenting minimal interface for serial and parallel parsing.
- parse :: FilePath -> String -> (Structure, List PDBEvent)
- parseSerial :: FilePath -> String -> (Structure, List PDBEvent)
- parseParallel :: FilePath -> ByteString -> (Structure, List PDBEvent)
- parseWithNParallel :: Integral a => a -> FilePath -> ByteString -> (Structure, List PDBEvent)
Documentation
parse :: FilePath -> String -> (Structure, List PDBEvent) Source
Default parser - uses parallel capabilities, if available.
parseSerial :: FilePath -> String -> (Structure, List PDBEvent) Source
Given filename, and contents, parses a whole PDB file, returning a monadic action | with a tuple of (Structure, [PDBEvent]), where the list of events contains all | parsing or construction errors.
parseParallel :: FilePath -> ByteString -> (Structure, List PDBEvent) Source
Parse file in parallel with as many threads as we have capabilities.
parseWithNParallel :: Integral a => a -> FilePath -> ByteString -> (Structure, List PDBEvent) Source
Parse input file with N parallel threads.