classify-frog: Classify sounds produced by Xenopus laevis
This program is part of the Xenocall project. Researchers observed that the amount and duration of calls of the African clawed frog (Xenopus laevis) change when exposed to hormonal effective substances. The Xenocall project checks whether this effect can be used as an endpoint in animal tests instead of dissecting animals after the experiments.
An experiment for one substance may produce about 100 hours of audio recordings. It is a very tedious and error-prone work to examine this amount of data visually or by listening. The purpose of this program is to examine the recordings automatically and generate tables with basic statistical parameters.
Read the full report at http://code.henning-thielemann.de/classify-frog-doc/report.pdf.
Flags
Automatic Flags
| Name | Description | Default |
|---|---|---|
| buildsketch | Enable some sketch programs | Disabled |
| llvm | Enable efficient signal processing using LLVM | Enabled |
Use -f <flag> to enable a flag, or -f -<flag> to disable that flag. More info
Downloads
- classify-frog-0.2.4.3.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
Maintainer's Corner
For package maintainers and hackage trustees
Candidates
| Versions [RSS] | 0.2.3, 0.2.4.1, 0.2.4.2, 0.2.4.3 |
|---|---|
| Dependencies | array (>=0.4 && <0.6), audacity (>=0.0.1 && <0.1), base (>=4 && <5), bifunctors (>=5 && <6), carray (>=0.1.5 && <0.2), comfort-array (>=0.4 && <0.5), concurrent-split (>=0.0 && <0.1), containers (>=0.4 && <0.7), deepseq (>=1.3 && <1.5), explicit-exception (>=0.1.8 && <0.2), fft (>=0.1.8 && <0.2), filemanip (>=0.3.6 && <0.4), gnuplot (>=0.5 && <0.6), hmm-lapack (>=0.4 && <0.5), lapack (>=0.3 && <0.4), lazy-csv (>=0.5 && <0.6), llvm-extra (>=0.8 && <0.9), llvm-tf (>=3.0 && <3.2), non-empty (>=0.3 && <0.4), numeric-prelude (>=0.4 && <0.5), optparse-applicative (>=0.11 && <0.15), parallel (>=3.2 && <3.3), pathtype (>=0.8 && <0.9), pooled-io (>=0.0.2 && <0.1), semigroups (>=0.8.4.1 && <1.0), shell-utility (>=0.0 && <0.1), soxlib (>=0.0 && <0.1), storable-record (>=0.0 && <0.1), storablevector (>=0.2.11 && <0.3), storablevector-carray (>=0.0 && <0.1), synthesizer-core (>=0.7.1 && <0.9), synthesizer-llvm (>=0.8.2 && <0.9), tagchup (>=0.4 && <0.5), text (>=1.1 && <1.3), time (>=1.5 && <1.9), transformers (>=0.2 && <0.6), utility-ht (>=0.0.12 && <0.1), xml-basic (>=0.1.1 && <0.2) [details] |
| Tested with | ghc ==7.4.2, ghc ==7.8.4 |
| License | BSD-3-Clause |
| Author | Henning Thielemann <haskell@henning-thielemann.de> |
| Maintainer | Henning Thielemann <haskell@henning-thielemann.de> |
| Category | Bioinformatics |
| Home page | http://code.haskell.org/~thielema/classify-frog/ |
| Source repo | this: darcs get http://hub.darcs.net/thielema/classify-frog --tag 0.2.4.3 head: darcs get http://hub.darcs.net/thielema/classify-frog |
| Uploaded | by HenningThielemann at 2019-08-13T19:06:46Z |
| Distributions | |
| Reverse Dependencies | 1 direct, 0 indirect [details] |
| Executables | spectral-distribution, classify-frog |
| Downloads | 2069 total (4 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
| Your Rating | |
| Status | Docs not available [build log] All reported builds failed as of 2019-08-13 [all 2 reports] |