| Safe Haskell | None |
|---|
BioInf.RNAdesign
- probabilityDefectAll :: (Show a, Unbox a) => Vector a -> [D1Secondary] -> Double
- ensembleDefect :: (Show a, Unbox a) => Vector a -> D1Secondary -> Double
- resolveOpt :: String -> t -> Primary -> [D1Secondary] -> Double
- lmn :: [Double] -> Vector Nuc -> Double
- scoreSequence :: String -> Vienna2004 -> DesignProblem -> Primary -> Score
- mkDesignProblem :: Int -> [String] -> String -> DesignProblem
Documentation
probabilityDefectAll :: (Show a, Unbox a) => Vector a -> [D1Secondary] -> DoubleSource
ensembleDefect :: (Show a, Unbox a) => Vector a -> D1Secondary -> DoubleSource
resolveOpt :: String -> t -> Primary -> [D1Secondary] -> DoubleSource
Resolve the optimization task. Each possible optimization function is given here. Try to keep the functions defined here in sync with some (non-existent ;-) documentation.
scoreSequence :: String -> Vienna2004 -> DesignProblem -> Primary -> ScoreSource
mkDesignProblem :: Int -> [String] -> String -> DesignProblemSource
Given a set of structures, create the set of independent graphs and assignment possibilities.