BiobaseHTTPTools: Tools to query Bioinformatics HTTP services e.g. Entrez, Ensembl.

BiobaseHTTP provides tools to interface the Bioinformatics REST services, currently Entrez, Ensembl.

Usage instructions can be found in the README

Currently following Tools are included:

• FetchSequences: Retrieves sequence in fasta format

• AccessionToTaxId: Converts NCBI accession number to taxonomy id

• GeneIdToGOTerms: Retrieve GOterms for a Ensembl GeneId

• GeneIdToUniProtId Retrieves UniProtId for a Ensembl GeneId

Downloads

• BiobaseHTTPTools-1.0.0.tar.gz [browse] (Cabal source package)
• Package description (revised from the package)

Note: This package has metadata revisions in the cabal description newer than included in the tarball. To unpack the package including the revisions, use 'cabal get'.

Maintainer's Corner

Package maintainers

• FlorianEggenhofer

For package maintainers and hackage trustees

• edit package information

Candidates

• No Candidates